Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O12
         (238 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          27   0.041
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   0.67 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.67 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.67 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.67 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   1.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   2.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   2.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   8.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   8.3  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 26.6 bits (56), Expect = 0.041
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 107 RSEIKTRIASGNTGGPVRKNTNRGGGPNRNQNASNSGG 220
           R+   + I +GN       N N     N N N +N  G
Sbjct: 221 RNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNG 258


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
           +GN     ++N NR  G  +N N  N       +R
Sbjct: 481 NGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKR 515



 Score = 22.2 bits (45), Expect = 0.89
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASN 211
           +GN     R+N N+  G  +N N  N
Sbjct: 456 NGNRQNDNRQNDNKQNGNRQNDNKQN 481



 Score = 21.8 bits (44), Expect = 1.2
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +2

Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASNSGGMRGARR 238
           + N      +N N+  G  +N N  N     G R+
Sbjct: 441 NANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQ 475



 Score = 21.8 bits (44), Expect = 1.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 158 RKNTNRGGGPNRNQNASNSGGMRGARR 238
           R+N N+  G  +N N  N     G ++
Sbjct: 474 RQNDNKQNGNRQNDNKQNGNRQNGNKQ 500



 Score = 21.0 bits (42), Expect = 2.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASN 211
           +GN     ++N NR      NQN +N
Sbjct: 506 NGNRQNDNKRNGNRQNDNQNNQNDNN 531



 Score = 20.2 bits (40), Expect = 3.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 134 SGNTGGPVRKNTNRGGGPNRNQNASN 211
           +GN     ++N N+  G  +N N  N
Sbjct: 491 NGNRQNGNKQNDNKQNGNRQNDNKRN 516



 Score = 19.0 bits (37), Expect = 8.3
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +2

Query: 125 RIASGNTGGPVRKNTNRGGGPNRNQNASN 211
           R  + N G     N N       NQNA N
Sbjct: 421 RYHNQNAGNQNADNQNADNQNANNQNADN 449


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 7   GADALKAMKQYNGVPL 54
           G   L+A K+YN VP+
Sbjct: 442 GGSVLRATKEYNTVPI 457


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 7   GADALKAMKQYNGVPL 54
           G   L+A K+YN VP+
Sbjct: 442 GGSVLRATKEYNTVPI 457


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 7   GADALKAMKQYNGVPL 54
           G   L+A K+YN VP+
Sbjct: 442 GGSVLRATKEYNTVPI 457


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 28  MKQYNGVPLDGRAMNIQISYFRSQ*FQ 108
           ++  NG+   GR  N+Q+   R+Q  Q
Sbjct: 315 LRGLNGLEFAGRPQNLQLQSQRNQLIQ 341


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 128 IASGNTGGPVRKNTNRGGG 184
           + +G +GG +    N GGG
Sbjct: 30  VVTGASGGSIVVGANNGGG 48


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 172 VGIFPNGASSVSTSNASFYFTP 107
           V I P  A S+STS +S   TP
Sbjct: 300 VKIEPAEAESLSTSGSSGILTP 321


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +1

Query: 127 HC*WKHWRPR*EKYQQRWWTKQ 192
           H  W  W P      Q+W  +Q
Sbjct: 470 HLVWNSWMPSIRGAIQQWTCRQ 491


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 152 PVRKNTNRGGGPNRNQNASNSGGMR 226
           P+R+  +RG       NA+++ G +
Sbjct: 314 PLRREKDRGSREYPTSNATDTDGTK 338


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 113  EIKTRIASGNTGGPVRKNTNRGGGPN 190
            E  T   +G T  P R+  +  GG N
Sbjct: 1548 EFATLTVTGGTIAPARELPDVNGGGN 1573


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = +3

Query: 210 IVVECEEP 233
           +++EC+EP
Sbjct: 710 VIIECQEP 717


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,314
Number of Sequences: 438
Number of extensions: 790
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)