Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O08
         (323 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    81   8e-18
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   2.2  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    22   6.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            21   8.8  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    21   8.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   8.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 81.4 bits (192), Expect = 8e-18
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLK 321
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLK 81


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 117 DREKSSGRSTCGEES*AQEDCKPS 188
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein
          RS11 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 39 GHVSIRGR*IT 71
          GH+SIRGR +T
Sbjct: 59 GHISIRGRILT 69


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 232 QPTRDLSRFVRWPKYIRIQRQKAV 303
           +PTR L  F RW   +   R   V
Sbjct: 465 EPTRHLDIFKRWKSILASSRTDTV 488


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 177 CKPSIREENKEL 212
           C+P++ E+NK+L
Sbjct: 340 CRPTVDEKNKQL 351


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 195  EENKELCYWPGHPANQRSIPFRAMAE 272
            E +   CY P +   Q SIP +++A+
Sbjct: 1850 EADNGSCYIPYNLVTQHSIPDKSVAD 1875


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,973
Number of Sequences: 2352
Number of extensions: 4379
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)