Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O06
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 75 5e-14
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 75 5e-14
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 75 5e-14
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 75 5e-14
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 75 5e-14
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 75 5e-14
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 73 2e-13
X00663-1|CAA25282.1| 800|Homo sapiens protein ( Human mRNA frag... 33 0.15
X00588-1|CAA25240.1| 1210|Homo sapiens epidermal growth factor r... 33 0.15
BC094761-1|AAH94761.1| 1091|Homo sapiens EGFR protein protein. 33 0.15
AY588246-1|AAS83109.1| 1210|Homo sapiens epidermal growth factor... 33 0.15
AY550966-1|AAT52212.1| 1210|Homo sapiens cell growth inhibiting ... 33 0.15
AF288738-1|AAG35789.1| 1210|Homo sapiens p170 epidermal growth f... 33 0.15
AB209442-1|BAD92679.1| 1081|Homo sapiens epidermal growth factor... 33 0.15
L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase ... 31 0.80
BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic ... 31 0.80
AB209697-1|BAD92934.1| 892|Homo sapiens v-erb-a erythroblastic ... 31 0.80
X03363-1|CAA27060.1| 1255|Homo sapiens protein ( Human c-erb-B-2... 30 1.4
M12036-1|AAA35978.1| 171|Homo sapiens protein ( Human tyrosine ... 30 1.4
M11767-1|AAA35808.1| 295|Homo sapiens protooncogene protein pro... 30 1.4
M11730-1|AAA75493.1| 1255|Homo sapiens protein ( Human tyrosine ... 30 1.4
AY208911-1|AAO18082.1| 1255|Homo sapiens v-erb-b2 erythroblastic... 30 1.4
AK131568-1|BAD18701.1| 435|Homo sapiens protein ( Homo sapiens ... 30 1.4
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 29 2.4
AB221350-1|BAE15960.1| 65|Homo sapiens ERBB2 protein. 29 2.4
AB221349-1|BAE15959.1| 63|Homo sapiens ERBB2 protein. 29 2.4
AY358862-1|AAQ89221.1| 110|Homo sapiens RLSC6348 protein. 29 3.2
AC068970-1|AAX88856.1| 136|Homo sapiens unknown protein. 29 3.2
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 SPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
+PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GEIV Q+ EKSP+R++
Sbjct: 19 TPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVK 76
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/61 (54%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 106 RKRSPKA-LPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRL 282
R +PK PP+ ++RIF+P+ +VAKSRFWYF+ QLKK KK++GE V Q+ EKSP+R+
Sbjct: 16 RLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRV 75
Query: 283 R 285
+
Sbjct: 76 K 76
>X00663-1|CAA25282.1| 800|Homo sapiens protein ( Human mRNA
fragment for epidermal growth factor (EGF) receptor. ).
Length = 800
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 637 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 688
>X00588-1|CAA25240.1| 1210|Homo sapiens epidermal growth factor
receptor protein.
Length = 1210
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 779 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 830
>BC094761-1|AAH94761.1| 1091|Homo sapiens EGFR protein protein.
Length = 1091
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 734 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 785
>AY588246-1|AAS83109.1| 1210|Homo sapiens epidermal growth factor
receptor (erythroblastic leukemia viral (v-erb-b) oncog
protein.
Length = 1210
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 779 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 830
>AY550966-1|AAT52212.1| 1210|Homo sapiens cell growth inhibiting
protein 40 protein.
Length = 1210
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 779 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 830
>AF288738-1|AAG35789.1| 1210|Homo sapiens p170 epidermal growth
factor receptor protein.
Length = 1210
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 779 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 830
>AB209442-1|BAD92679.1| 1081|Homo sapiens epidermal growth factor
receptor isoform a variant protein.
Length = 1081
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ + L F CL Y + IGS + +LN+C+ A G+ +L +
Sbjct: 650 GICLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCV-QIAKGMNYLED 701
>L07868-1|AAB59446.1| 1308|Homo sapiens receptor tyrosine kinase
protein.
Length = 1308
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
G+CL TI V L CL +Y IGS + +LN+C+ A G+ +L E
Sbjct: 785 GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCV-QIAKGMMYLEE 836
>BC112199-1|AAI12200.1| 1308|Homo sapiens v-erb-a erythroblastic
leukemia viral oncogene homolog 4 (avian) protein.
Length = 1308
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
G+CL TI V L CL +Y IGS + +LN+C+ A G+ +L E
Sbjct: 785 GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCV-QIAKGMMYLEE 836
>AB209697-1|BAD92934.1| 892|Homo sapiens v-erb-a erythroblastic
leukemia viral oncogene homolog 4 variant protein.
Length = 892
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
G+CL TI V L CL +Y IGS + +LN+C+ A G+ +L E
Sbjct: 385 GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCV-QIAKGMMYLEE 436
>X03363-1|CAA27060.1| 1255|Homo sapiens protein ( Human c-erb-B-2
mRNA. ).
Length = 1255
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 787 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 838
>M12036-1|AAA35978.1| 171|Homo sapiens protein ( Human tyrosine
kinase-type receptor (HER2) gene, partial cds. ).
Length = 171
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 48 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 99
>M11767-1|AAA35808.1| 295|Homo sapiens protooncogene protein
protein.
Length = 295
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 51 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 102
>M11730-1|AAA75493.1| 1255|Homo sapiens protein ( Human tyrosine
kinase-type receptor (HER2) mRNA, complete cds. ).
Length = 1255
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 787 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 838
>AY208911-1|AAO18082.1| 1255|Homo sapiens v-erb-b2 erythroblastic
leukemia viral oncogene homolog 2, neuro/glioblastoma d
protein.
Length = 1255
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 787 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 838
>AK131568-1|BAD18701.1| 435|Homo sapiens protein ( Homo sapiens
cDNA FLJ16821 fis, clone TRACH3021066, highly similar
to Receptor protein-tyrosine kinase ERBB-2 precursor (EC
2.7.1.112). ).
Length = 435
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGLRFLHE 99
GICL T+ V L + CL + + + +GS + +LN+C+ A G+ +L +
Sbjct: 337 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM-QIAKGMSYLED 388
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 177 KISFLVFLEAVEEVQKDYW*NCIHQANSRKESCKIKNFGIWL 302
++ LV +V+E ++ + +C+ K ++KNFGIWL
Sbjct: 5 QVPLLVLCVSVKEDEEVFRGDCLLWQVFEKSPLRVKNFGIWL 46
>AB221350-1|BAE15960.1| 65|Homo sapiens ERBB2 protein.
Length = 65
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCI 135
GICL T+ V L + CL + + + +GS + +LN+C+
Sbjct: 21 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM 61
>AB221349-1|BAE15959.1| 63|Homo sapiens ERBB2 protein.
Length = 63
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCI 135
GICL T+ V L + CL + + + +GS + +LN+C+
Sbjct: 19 GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCM 59
>AY358862-1|AAQ89221.1| 110|Homo sapiens RLSC6348 protein.
Length = 110
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 117 APLSSRXGEGFWRGHINGPHQ*LLFQTSPLFGLSF*PS 4
+PL SR G +W GP +F PL SF PS
Sbjct: 64 SPLKSRAGRCYWCFFTLGPSSIFVFSVYPLPDTSFSPS 101
>AC068970-1|AAX88856.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 260 GICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCI 135
G+CL TI V L CL +Y IGS + +LN+C+
Sbjct: 92 GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCV 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,772,422
Number of Sequences: 237096
Number of extensions: 1144426
Number of successful extensions: 2610
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2610
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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