Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O06
(325 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 90 5e-19
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 90 5e-19
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 90 5e-19
BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p pro... 31 0.34
AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA... 31 0.34
AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p pro... 28 2.4
AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-P... 28 2.4
M12896-1|AAA28734.1| 381|Drosophila melanogaster protein ( D.me... 28 3.2
BT003450-1|AAO39453.1| 381|Drosophila melanogaster RH44056p pro... 28 3.2
AE014297-2590|AAF55601.1| 381|Drosophila melanogaster CG16740-P... 28 3.2
AE014297-1230|AAF54577.1| 457|Drosophila melanogaster CG14696-P... 27 5.6
AY069111-1|AAL39256.1| 273|Drosophila melanogaster GH12661p pro... 26 9.7
AE014296-695|AAF47794.2| 273|Drosophila melanogaster CG32262-PA... 26 9.7
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = +1
Query: 133 PIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
P+ K+RIF+PD IVAKSRFWYFLRQLKKFKKTTGEIVSIKQ+ E SPV+++
Sbjct: 26 PLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIK 76
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 114 EPQSPPSYTKIEDFLS*SYCGKISFLVFLEAVEEVQKDYW*NCIHQANSRKESCKIKNFG 293
EPQ+P K+ F + K F FL +++ +K + KIKNFG
Sbjct: 22 EPQTP--LYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFG 79
Query: 294 IWL 302
IWL
Sbjct: 80 IWL 82
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = +1
Query: 133 PIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
P+ K+RIF+PD IVAKSRFWYFLRQLKKFKKTTGEIVSIKQ+ E SPV+++
Sbjct: 26 PLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIK 76
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 114 EPQSPPSYTKIEDFLS*SYCGKISFLVFLEAVEEVQKDYW*NCIHQANSRKESCKIKNFG 293
EPQ+P K+ F + K F FL +++ +K + KIKNFG
Sbjct: 22 EPQTP--LYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFG 79
Query: 294 IWL 302
IWL
Sbjct: 80 IWL 82
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = +1
Query: 133 PIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPVRLR 285
P+ K+RIF+PD IVAKSRFWYFLRQLKKFKKTTGEIVSIKQ+ E SPV+++
Sbjct: 26 PLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIK 76
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 114 EPQSPPSYTKIEDFLS*SYCGKISFLVFLEAVEEVQKDYW*NCIHQANSRKESCKIKNFG 293
EPQ+P K+ F + K F FL +++ +K + KIKNFG
Sbjct: 22 EPQTP--LYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFG 79
Query: 294 IWL 302
IWL
Sbjct: 80 IWL 82
>BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p
protein.
Length = 527
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 136 IQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPV 276
++ RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 22 LEGARILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA
protein.
Length = 527
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 136 IQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSPV 276
++ RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 22 LEGARILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p
protein.
Length = 787
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 144 FLYRREGFGAPLSSRXGEGFWRGHING 64
+L+R+ G P+++ G G GH+NG
Sbjct: 377 YLFRKLGVNCPMANGNGTGPGSGHVNG 403
>AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-PA
protein.
Length = 787
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 144 FLYRREGFGAPLSSRXGEGFWRGHING 64
+L+R+ G P+++ G G GH+NG
Sbjct: 377 YLFRKLGVNCPMANGNGTGPGSGHVNG 403
>M12896-1|AAA28734.1| 381|Drosophila melanogaster protein (
D.melanogaster opsingene Rh2, complete cds. ).
Length = 381
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 287 VLNLTGLFSGICLMDTISPVVFLNFF 210
VLNL FS C+M + SPV+ +NF+
Sbjct: 96 VLNLA--FSDFCMMASQSPVMIINFY 119
>BT003450-1|AAO39453.1| 381|Drosophila melanogaster RH44056p
protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 287 VLNLTGLFSGICLMDTISPVVFLNFF 210
VLNL FS C+M + SPV+ +NF+
Sbjct: 96 VLNLA--FSDFCMMASQSPVMIINFY 119
>AE014297-2590|AAF55601.1| 381|Drosophila melanogaster CG16740-PA
protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 287 VLNLTGLFSGICLMDTISPVVFLNFF 210
VLNL FS C+M + SPV+ +NF+
Sbjct: 96 VLNLA--FSDFCMMASQSPVMIINFY 119
>AE014297-1230|AAF54577.1| 457|Drosophila melanogaster CG14696-PA
protein.
Length = 457
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 150 PQFLYRREGFGAPLSSRXGEGFWRGHINGPHQ*LLFQTS 34
P L RR + PL + FW G I G H+ ++ S
Sbjct: 151 PHDLNRRLEYKEPLQRLESKSFWWGSIFGAHKPMIMDVS 189
>AY069111-1|AAL39256.1| 273|Drosophila melanogaster GH12661p
protein.
Length = 273
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 188 KRDFATIGSGEKILNFCIGGRALGLRFLHEXGKAFGGA 75
+RDFA + ++ + +G + GLRF H G+ GGA
Sbjct: 22 RRDFAALC---RMRSHGVGYQKYGLRFTHGKGETEGGA 56
>AE014296-695|AAF47794.2| 273|Drosophila melanogaster CG32262-PA
protein.
Length = 273
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 188 KRDFATIGSGEKILNFCIGGRALGLRFLHEXGKAFGGA 75
+RDFA + ++ + +G + GLRF H G+ GGA
Sbjct: 22 RRDFAALC---RMRSHGVGYQKYGLRFTHGKGETEGGA 56
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,322,069
Number of Sequences: 53049
Number of extensions: 323140
Number of successful extensions: 886
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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