Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O06
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-9|AAB92041.2| 180|Caenorhabditis elegans Ribosomal pro... 64 3e-11
Z70209-2|CAA94145.2| 236|Caenorhabditis elegans Hypothetical pr... 28 1.3
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 28 1.3
U20861-14|AAN63440.1| 245|Caenorhabditis elegans Hypothetical p... 28 1.8
U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical p... 28 1.8
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 27 2.3
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 27 2.3
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 4.1
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 27 4.1
AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein. 27 4.1
AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast m... 27 4.1
AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast m... 27 4.1
AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical ... 26 5.4
AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical... 26 5.4
Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical pr... 26 7.2
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 26 7.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 26 7.2
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 26 7.2
U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical pr... 26 7.2
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 26 7.2
EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4 ... 26 7.2
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 26 7.2
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 26 7.2
AF016414-1|AAG24023.2| 577|Caenorhabditis elegans Hypothetical ... 26 7.2
Z81570-6|CAB04607.2| 725|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 25 9.5
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 25 9.5
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 25 9.5
AY887911-1|AAX34423.1| 737|Caenorhabditis elegans anion transpo... 25 9.5
AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical ... 25 9.5
>AF038611-9|AAB92041.2| 180|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 20 protein.
Length = 180
Score = 63.7 bits (148), Expect = 3e-11
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +1
Query: 133 PIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEKSP 273
PI K++IF+ + ++AKSRFWYF+ L++ KK GEI+SIKQ+ EK+P
Sbjct: 29 PIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQVFEKNP 75
>Z70209-2|CAA94145.2| 236|Caenorhabditis elegans Hypothetical
protein K02D3.2 protein.
Length = 236
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 251 LMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFC 138
++DT+ P +FF L+KY +D + ++ +C
Sbjct: 193 IVDTLMPKGIASFFEDLQKYASKDCTKVSLNHQLTGWC 230
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 79 PPKAFPXS*RKRSPKALPPIQKLRIFSPDPIVAKSRFW 192
P K P RKR K P ++ + +P+P+V K+ W
Sbjct: 553 PKKKKPKKHRKRPKKKKPVVEPEKEPTPEPVVPKAPKW 590
>U20861-14|AAN63440.1| 245|Caenorhabditis elegans Hypothetical
protein C28H8.11b protein.
Length = 245
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 293 TKVLNLTGLFSGICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGL 114
TK+L+L L I L+DT+SP+ F++F R + T SG + L F + LG+
Sbjct: 115 TKILSL--LTEQITLLDTMSPLDFVDF---------RKYLTPASGFQSLQFRVLENKLGV 163
Query: 113 R 111
R
Sbjct: 164 R 164
>U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical
protein C28H8.11a protein.
Length = 403
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 293 TKVLNLTGLFSGICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILNFCIGGRALGL 114
TK+L+L L I L+DT+SP+ F++F R + T SG + L F + LG+
Sbjct: 115 TKILSL--LTEQITLLDTMSPLDFVDF---------RKYLTPASGFQSLQFRVLENKLGV 163
Query: 113 R 111
R
Sbjct: 164 R 164
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +1
Query: 79 PPKAFPXS*RKRSPKALPPI--QKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIK 252
P +P SP PP+ +KL I P P K + W + L + + +
Sbjct: 194 PMPGWPLLDNNLSPSRPPPLSHEKLVIGGPPPYSPKKKHWLYFNMLATIEYAKTFMFFHE 253
Query: 253 QIPEKSPVRLRTLVSGCLRV 312
+P + +R C+ +
Sbjct: 254 LLPRDQLILIRYTTLACVNL 273
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +1
Query: 79 PPKAFPXS*RKRSPKALPPI--QKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIK 252
P +P SP PP+ +KL I P P K + W + L + + +
Sbjct: 173 PMPGWPLLDNNLSPSRPPPLSHEKLVIGGPPPYSPKKKHWLYFNMLATIEYAKTFMFFHE 232
Query: 253 QIPEKSPVRLRTLVSGCLRV 312
+P + +R C+ +
Sbjct: 233 LLPRDQLILIRYTTLACVNL 252
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 311 TRKQPDTKVLNLT-GLFSGICLMDT--ISPVVFLNFFNCLKK 195
+RK P T + LT +F L +SP+ F NFF+ L+K
Sbjct: 207 SRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEK 248
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 311 TRKQPDTKVLNLT-GLFSGICLMDT--ISPVVFLNFFNCLKK 195
+RK P T + LT +F L +SP+ F NFF+ L+K
Sbjct: 86 SRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEK 127
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 311 TRKQPDTKVLNLT-GLFSGICLMDT--ISPVVFLNFFNCLKK 195
+RK P T + LT +F L +SP+ F NFF+ L+K
Sbjct: 207 SRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEK 248
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 311 TRKQPDTKVLNLT-GLFSGICLMDT--ISPVVFLNFFNCLKK 195
+RK P T + LT +F L +SP+ F NFF+ L+K
Sbjct: 207 SRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEK 248
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -3
Query: 311 TRKQPDTKVLNLT-GLFSGICLMDT--ISPVVFLNFFNCLKK 195
+RK P T + LT +F L +SP+ F NFF+ L+K
Sbjct: 86 SRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEK 127
>AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein.
Length = 203
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 139 QKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEK 267
+KL+ F DP++ + +W RQLK+ E V K++ E+
Sbjct: 58 KKLQAFM-DPLLQQVEYWLAKRQLKRLVMVISE-VKTKEVVER 98
>AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform b
protein.
Length = 116
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 139 QKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEK 267
+KL+ F DP++ + +W RQLK+ E V K++ E+
Sbjct: 58 KKLQAFM-DPLLQQVEYWLAKRQLKRLVMVISE-VKTKEVVER 98
>AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform a
protein.
Length = 203
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 139 QKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEK 267
+KL+ F DP++ + +W RQLK+ E V K++ E+
Sbjct: 58 KKLQAFM-DPLLQQVEYWLAKRQLKRLVMVISE-VKTKEVVER 98
>AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical
protein C17H12.4 protein.
Length = 592
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 109 KRSPKALPPIQKLRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKQIPEK 267
K P A PPI KLR P+P W +R K + S+ P+K
Sbjct: 48 KHIPLAKPPIGKLRFQKPEP----PEKWTGVRNAKAYGPACISNSSVSTSPQK 96
>AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical
protein Y51H7C.2 protein.
Length = 246
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 129 EGFGAPLSSRXGEGFWRGHIN 67
+G PL GE W GHIN
Sbjct: 78 KGHDGPLEGVSGECMWSGHIN 98
>Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical
protein F11A6.2 protein.
Length = 260
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 305 KQPDTKVLNLTGLFSGICLMDTISPVVFLNFFNCLKKYQKRD 180
+QP T VL L S + + + + PV L + K+YQ R+
Sbjct: 14 EQPPTTVLQLLTSLSKVEVHEIMQPVEILADWGTAKRYQIRN 55
>Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical protein
C35C5.6 protein.
Length = 1224
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 269 LFSGICLM-DTISPVVFLNFFNCLKKYQKRDFATIGSGE 156
L S + L+ + P + L+FF K+Y D T+G G+
Sbjct: 1080 LLSSVSLLKQLVLPAISLDFFVNGKQYVSEDDVTVGIGQ 1118
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 279 SYRTLFWNLLDGYNFTSSLF 220
SY FWN+LDG T +LF
Sbjct: 798 SYCRDFWNILDGIVVTCALF 817
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 279 SYRTLFWNLLDGYNFTSSLF 220
SY FWN+LDG T +LF
Sbjct: 798 SYCRDFWNILDGIVVTCALF 817
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 279 SYRTLFWNLLDGYNFTSSLF 220
SY FWN+LDG T +LF
Sbjct: 917 SYCRDFWNILDGIVVTCALF 936
>U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical
protein K07C11.4 protein.
Length = 571
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 179 FATIGSGEKILNFCIGGRALGLRFLHEXGKAFGG 78
F T G E N + + L L+FLHE FGG
Sbjct: 167 FFTTGDSEIPGNMGLWDQTLALQFLHEVLPDFGG 200
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 279 SYRTLFWNLLDGYNFTSSLF 220
SY FWN+LDG T +LF
Sbjct: 404 SYCRDFWNILDGIVVTCALF 423
>EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4
protein.
Length = 265
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 305 KQPDTKVLNLTGLFSGICLMDTISPVVFLNFFNCLKKYQKRD 180
+QP T VL L S + + + + PV L + K+YQ R+
Sbjct: 14 EQPPTTVLQLLTSLSKVEVHEIMQPVEILADWGTAKRYQIRN 55
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 279 SYRTLFWNLLDGYNFTSSLF 220
SY FWN+LDG T +LF
Sbjct: 917 SYCRDFWNILDGIVVTCALF 936
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 276 YRTLFWNLLDGYNFTSSLFELLQLPQEIPETRF 178
+R ++WNLLD F + L E+ + + + E+ +
Sbjct: 219 FRAVYWNLLDKLRFKTGL-EIRNIDEIVAESAY 250
>AF016414-1|AAG24023.2| 577|Caenorhabditis elegans Hypothetical
protein D1065.3 protein.
Length = 577
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 FLEAVEEVQKDYW*NCIHQANSRKESCKIKNFG 293
FL +VE+ D + NCI NS + K+K FG
Sbjct: 403 FLSSVEKAN-DGFQNCIFLRNSSFDLLKLKQFG 434
>Z81570-6|CAB04607.2| 725|Caenorhabditis elegans Hypothetical
protein K12G11.2 protein.
Length = 725
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 314 ETRKQPDTKVLNLTGLFSGICLMDTISPVVFLNFFNCLKK 195
+T + DT+ T + GIC+ +P++F N C KK
Sbjct: 527 DTDEFSDTQQYQETIFYKGICIFKFDAPLLFHN-VECFKK 565
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 258 NLLDGYNFTSSLFELLQLPQEIPETRFCH 172
+++ Y+FT+ F L++ E PE F H
Sbjct: 445 SVIQSYDFTARSFPKLRVDSETPEGVFSH 473
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 258 NLLDGYNFTSSLFELLQLPQEIPETRFCH 172
+++ Y+FT+ F L++ E PE F H
Sbjct: 447 SVIQSYDFTARSFPKLRVDSETPEGVFSH 475
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 65 PLMWPRQKPSPXREESGAPKPSLLYK 142
P+ +P+ KP P + PKP L K
Sbjct: 106 PMPFPKPKPMPKHKPKPFPKPMLFPK 131
>AY887911-1|AAX34423.1| 737|Caenorhabditis elegans anion
transporter SULP-5 protein.
Length = 737
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 314 ETRKQPDTKVLNLTGLFSGICLMDTISPVVFLNFFNCLKK 195
+T + DT+ T + GIC+ +P++F N C KK
Sbjct: 539 DTDEFSDTQQYQETIFYKGICIFKFDAPLLFHN-VECFKK 577
>AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical
protein Y60A3A.8 protein.
Length = 372
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 83 GGATLMDHINNFFFKLLHFSAFHFSPR 3
G L I NF K LH S+FHF+ R
Sbjct: 264 GEQELWTVIQNFIRKNLHGSSFHFTYR 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,933,359
Number of Sequences: 27780
Number of extensions: 168240
Number of successful extensions: 597
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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