Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O06
(325 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.17
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 3.7
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 4.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 4.9
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 4.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.9
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 21 4.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 6.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 6.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 6.5
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 25.4 bits (53), Expect = 0.17
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 320 QSETRKQPDTKVLNLTGLFSGICLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKIL 147
+ ET DT+ LNL L + + ++ S V L + F T S EK+L
Sbjct: 52 REETEDAEDTQTLNLKHLRAAVLVLTNPSNEVVAVALGALLSKGEESFPTARSLEKLL 109
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 3.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 217 FKKTTGEIVSIKQIPEKSPV 276
+KK I++I+QIP PV
Sbjct: 349 YKKLYYNIINIEQIPVPVPV 368
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 46 PVYIPQPRPPHPRLRRE 62
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 74 PVYIPQPRPPHPRLRRE 90
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 130 PVYIPQPRPPHPRLRRE 146
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 186 PVYIPQPRPPHPRLRRE 202
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 214 PVYIPQPRPPHPRLRRE 230
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 242 PVYIPQPRPPHPRLRRE 258
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 47 PVYIPQPRPPHPRLRRE 63
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 75 PVYIPQPRPPHPRLRRE 91
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 103 PVYIPQPRPPHPRLRRE 119
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 103 PVYIPQPRPPHPRLRRE 119
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 129 PVYIPQPRPPHPRLRRE 145
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 47 PIYIPQPRPPHPRLRRE 63
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 75 PIYIPQPRPPHPRLRRE 91
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 360 NPPSGYIRSAFGTPIST 376
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 428 NPPSGYIRSAFGTPIST 444
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 153 NPQFLYRREGFGAPLSS 103
NP Y R FG P+S+
Sbjct: 428 NPPSGYIRSAFGTPIST 444
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 18 PVYIPQPRPPHPRLRRE 34
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 46 PVYIPQPRPPHPRLRRE 62
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 74 PVYIPQPRPPHPRLRRE 90
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 102 PVYIPQPRPPHPRLRRE 118
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 130 PVYIPQPRPPHPRLRRE 146
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 204 PQEIPETRFCHNRIRRE 154
P IP+ R H R+RRE
Sbjct: 158 PVYIPQPRPPHPRLRRE 174
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 278 LTGLFSGICLMDTISPVVFLN 216
L+ LFS CL+ T SP +N
Sbjct: 188 LSSLFSKGCLVGTWSPDPAIN 208
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 278 LTGLFSGICLMDTISPVVFLN 216
L+ LFS CL+ T SP +N
Sbjct: 188 LSSLFSKGCLVGTWSPDPAIN 208
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 278 LTGLFSGICLMDTISPVVFLN 216
L+ LFS CL+ T SP +N
Sbjct: 188 LSSLFSKGCLVGTWSPDPAIN 208
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,546
Number of Sequences: 438
Number of extensions: 2128
Number of successful extensions: 32
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7093251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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