Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O05
(354 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 31 0.23
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 27 2.8
Z83129-7|CAB05644.1| 256|Caenorhabditis elegans Hypothetical pr... 27 5.0
AL021508-1|CAA16431.1| 170|Caenorhabditis elegans Hypothetical ... 27 5.0
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 26 6.6
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 26 6.6
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 26 6.6
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 26 6.6
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 26 6.6
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 26 8.7
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 285 TKAMISKPAPEWEATAVLNGEF 350
+KA I KPAP+++ AV++GEF
Sbjct: 2 SKAFIGKPAPQFKTQAVVDGEF 23
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 250 PGNTFPLPKA*PESLSNNDDLQFVQPNNNTIETT 149
P +T P+P A P + NN + + P N T + T
Sbjct: 608 PQSTEPVPPAMPTLVENNHEATLILPPNKTSDYT 641
>Z83129-7|CAB05644.1| 256|Caenorhabditis elegans Hypothetical
protein W06G6.12 protein.
Length = 256
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 215 WLCFWKWECISWWSKKR*SQTTVH 286
+L F WEC ++W KR S H
Sbjct: 114 YLVFAHWECCAYWVSKRMSSQEHH 137
>AL021508-1|CAA16431.1| 170|Caenorhabditis elegans Hypothetical
protein Y70C5B.1 protein.
Length = 170
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 215 WLCFWKWECISWWSKKR*SQTTVH 286
+L F WEC ++W KR S H
Sbjct: 28 YLVFAHWECCAYWVSKRMSSQEHH 51
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 135 IMKYIVVSIVLLLGCTNCKSSLFESDSGYAFGSGNVFPGGAR 260
I+ Y+++ L + C + E + F G + PGGA+
Sbjct: 48 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAK 89
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 135 IMKYIVVSIVLLLGCTNCKSSLFESDSGYAFGSGNVFPGGAR 260
I+ Y+++ L + C + E + F G + PGGA+
Sbjct: 123 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAK 164
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 135 IMKYIVVSIVLLLGCTNCKSSLFESDSGYAFGSGNVFPGGAR 260
I+ Y+++ L + C + E + F G + PGGA+
Sbjct: 123 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAK 164
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 135 IMKYIVVSIVLLLGCTNCKSSLFESDSGYAFGSGNVFPGGAR 260
I+ Y+++ L + C + E + F G + PGGA+
Sbjct: 123 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAK 164
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 135 IMKYIVVSIVLLLGCTNCKSSLFESDSGYAFGSGNVFPGGAR 260
I+ Y+++ L + C + E + F G + PGGA+
Sbjct: 123 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAK 164
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 235 PLPKA*PESLSNNDD-LQFVQPNNNTIE 155
P P+A PE LSN +D L P TIE
Sbjct: 605 PKPEAKPELLSNLEDVLTLTTPETETIE 632
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 235 PLPKA*PESLSNNDD-LQFVQPNNNTIE 155
P P+A PE LSN +D L P TIE
Sbjct: 605 PKPEAKPELLSNLEDVLTLTTPETETIE 632
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical
protein R06C7.8 protein.
Length = 987
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -3
Query: 352 VNSPFSTAVA--SHSGAGFDIMALVNC 278
++S +STA A S SGAG D+MA C
Sbjct: 371 ISSNYSTASARTSKSGAGLDLMAENKC 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,462,472
Number of Sequences: 27780
Number of extensions: 125672
Number of successful extensions: 304
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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