Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_O02
(458 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 205 2e-54
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 202 2e-53
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 189 2e-49
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 31 0.085
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.26
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.60
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 0.79
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.0
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.4
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 4.2
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 4.2
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 7.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 7.3
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 25 7.3
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 25 7.3
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 24 9.7
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 24 9.7
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 9.7
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 24 9.7
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 205 bits (501), Expect = 2e-54
Identities = 90/152 (59%), Positives = 119/152 (78%)
Frame = +1
Query: 1 ARGRDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVF 180
A R++I LAR+AR GNY+VP E KL FV+RIRG+N + PK RK++QL RL QINNG+F
Sbjct: 64 AAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIF 123
Query: 181 VRLNKATVNMLRIAEPYIAWGYPNWKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQ 360
V+ NKA ML++ EPY+ +G PN K+VREL+YKRGF K+N +R+P++ N++IE L K
Sbjct: 124 VKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKY 183
Query: 361 NIICVEDLIHEIFTVGEKFKYASNFLWTFKLN 456
+I+ VEDLIHEI+TVG FK A+NFLW FKL+
Sbjct: 184 SILSVEDLIHEIYTVGPNFKQAANFLWPFKLS 215
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 202 bits (493), Expect = 2e-53
Identities = 88/149 (59%), Positives = 117/149 (78%)
Frame = +1
Query: 10 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 189
R++I L R+AR GNYYVP E KL FVIRIRG+N + PK RK++QL RL QINNGVFV+
Sbjct: 68 REQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKF 127
Query: 190 NKATVNMLRIAEPYIAWGYPNWKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 369
NKAT ML++ EPY+ +G PN K+VREL+YKRGF K+N +R+ ++ N++IE L K +I+
Sbjct: 128 NKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSIL 187
Query: 370 CVEDLIHEIFTVGEKFKYASNFLWTFKLN 456
+EDLIHEI+TVG FK A+NF+W F+L+
Sbjct: 188 SIEDLIHEIYTVGPNFKQAANFIWPFQLS 216
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 189 bits (461), Expect = 2e-49
Identities = 86/150 (57%), Positives = 111/150 (74%)
Frame = +1
Query: 4 RGRDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFV 183
R R+ IRL R A+N+G+ +VP E KL FVIRI GV + PK+RKVL+L RL +INN VFV
Sbjct: 64 RERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFV 123
Query: 184 RLNKATVNMLRIAEPYIAWGYPNWKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQN 363
R NKA MLRI EPY+ +G PN SVREL+YKRGF K+NG+R+ ++ N+LIE+ L K +
Sbjct: 124 RNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYD 183
Query: 364 IICVEDLIHEIFTVGEKFKYASNFLWTFKL 453
+I +ED+IHEI+ VG FK + FLW F L
Sbjct: 184 VISIEDIIHEIYNVGSHFKEVTKFLWPFTL 213
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 31.1 bits (67), Expect = 0.085
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 332 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 436
HSS + L+N+ SSAL+++ + S +SSS+Q +S
Sbjct: 90 HSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSS 124
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.26
Identities = 30/105 (28%), Positives = 50/105 (47%)
Frame = +2
Query: 137 YCSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVS 316
Y + +G +++T + S VS+ + S SP T T S S +++ S + + S S
Sbjct: 116 YLTGNGVLQTTVSSSSVSSTTSSSS--SSSPSSSSTTTTTSPSSSSSSSSSSSS-SSSSS 172
Query: 317 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 451
S + SS ++ +SS+ SS S SSS +TS S+
Sbjct: 173 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217
Score = 25.4 bits (53), Expect = 4.2
Identities = 26/98 (26%), Positives = 46/98 (46%)
Frame = +2
Query: 143 SCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVSRS 322
S S S+++ S S+ + S S ++ + S S +++ S T S S S
Sbjct: 158 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217
Query: 323 PPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 436
HSS ++ +SS+ R SS ++ SSST +++
Sbjct: 218 ---HSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFIST 252
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 0.60
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +2
Query: 158 VRSTTACSFVSTRPQ*TC--FVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVSRSPPT 331
V ST++ +F S P T ++S S ++ ++ S S T++ + S S P T
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSS-----SLSTSSIPST 243
Query: 332 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 451
SS ++ TSS+L SS S SSS+ + S S+
Sbjct: 244 SSS----SSSTSSSLSSSSSSSTASSSSSSSSIISSSSSS 279
Score = 24.6 bits (51), Expect = 7.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +2
Query: 164 STTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVSRSPPTHSSR 343
S+++ SF ST + S S ++PT S + +++ SP+ + S S + + S
Sbjct: 311 SSSSSSFSSTLSSSSMSSSSS---FSSSPTSS-SSTISSSSSSPS-SSSFSSTTSSSKSS 365
Query: 344 RDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 451
++ SS+ SS S SSS +S HS+
Sbjct: 366 SSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSS 401
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 0.79
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +2
Query: 158 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TG-------SVS 316
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 460 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 517
Query: 317 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 436
+ P++++ L + S+ +SS + +SST +TS
Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTS 557
Score = 26.2 bits (55), Expect = 2.4
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +2
Query: 158 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TG-------SVS 316
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 346 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 403
Query: 317 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 436
+ P++++ L + S+ +SS + +SST ++S
Sbjct: 404 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSS 443
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 1.0
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 143 SCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVSRS 322
S S + S+++ S+ S S L ++ T S S+ T+ VS + S S S
Sbjct: 36 SSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
Query: 323 PP-THSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 436
T SS L + +S++ SS + LS SSS +S
Sbjct: 96 ASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASS 134
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.5 bits (58), Expect = 1.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 37 ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 156
+ N+G YY G +AFV I GV + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.4
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 206 TCFVSLSPILHGATPTGRVSESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRIS 385
T S S ++ ++P S S ++ S T S S S THSS A +SSA+ S
Sbjct: 676 TLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTS 735
Query: 386 -SMRYLLSVRSSSTQVTSCGHSN 451
+ L++ SS+T ++S S+
Sbjct: 736 VNSSTLITASSSNTLLSSITSSS 758
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.4 bits (53), Expect = 4.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 323 PPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 451
PP HS+ D++N ++ AL S+M + ++ST+ T ++N
Sbjct: 110 PPFHSANSDVSNNSNGALS-SNMLKTHAHHTNSTKSTIFRNAN 151
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -1
Query: 422 YLNFSPTVNISWMRSSTQMMFCLLSLFSMSELEVIGT 312
Y++ PT+++ ++ S+ +FCL L S++ LE++ T
Sbjct: 253 YVHEYPTLDLIYIFSALMSVFCL--LLSVASLELLHT 287
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 250 NWKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSK 357
NW + E+ ++ + GK+ P+ +++L + +L K
Sbjct: 135 NWFTTSEVTEEKKSNVVEGKQEPVNNDTLKDSKLQK 170
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 24.6 bits (51), Expect = 7.3
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 179 SFVSTRPQ*TCFVSLSPI-LHGATPTGRVSESWCTNAVSPN*TGSVSRSPPTHSSRRDLA 355
S V++ T F SLS L T S TNA S + S + PT +S L
Sbjct: 497 SLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKSS--LSTPSTTIPTSNSSVSL- 553
Query: 356 NRTSSALRISSMRYLLSVRSSSTQVTSCGHS 448
+TSS+L ISS S+ ++ST + HS
Sbjct: 554 -QTSSSLIISSPIISSSLTATSTSTPALTHS 583
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 24.6 bits (51), Expect = 7.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 247 PNWKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 369
P K+ REL+ K+ + V SN ++EK L +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 24.6 bits (51), Expect = 7.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 456 VQFECPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 337
V+F PQ + +L +KYL D+++ D+ A L+D
Sbjct: 136 VKFTEPQIKCYMKQLFAGTKYLHDQLILHRDLKAANLLID 175
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 24.2 bits (50), Expect = 9.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 62 CPVKLN*HLSSVFVVSTKYHPRYARYCSCSGCVRSTTAC 178
CP KL + + T+ +P RY SCSG V AC
Sbjct: 258 CP-KLPHLIFKIIEKMTRKNPD-ERYTSCSGIVNDLEAC 294
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 24.2 bits (50), Expect = 9.7
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +1
Query: 325 SNSLIEKRLSKQNIICVEDLIHE 393
S+++++KRL+K+N + E +I E
Sbjct: 1095 SDTILKKRLAKKNNVSAESIIIE 1117
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 242 ATPTGRVSESWCTNAVSPN*TGSVSRSPPTHSSRR 346
+TPT ESW + + S + SP T S +
Sbjct: 434 STPTTENKESWTNQGIKSSQQRSANASPATSPSNQ 468
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 24.2 bits (50), Expect = 9.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 277 TPTLGHSSSWGSPM 236
TPT G+SS+ GSPM
Sbjct: 627 TPTSGNSSTVGSPM 640
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,863,909
Number of Sequences: 5004
Number of extensions: 35833
Number of successful extensions: 131
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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