Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_O02
         (458 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   3.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   6.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   6.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   6.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 101 VVSTKYHPRYARYCSCSGCVRSTTACSFVSTR 196
           V+S KY   +   C CS    S T     S R
Sbjct: 318 VMSAKYRNAFKETCRCSPSNPSITRTGLSSVR 349


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 214 RIAEPYIAWGYPNWKSVRELV 276
           R+ +PY  W + N+K    +V
Sbjct: 106 RLLQPYPDWSWANYKDCSGIV 126


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 453 QFECPQEVTCVLELLTD 403
           QFE   ++T  LELLTD
Sbjct: 348 QFEADYKLTRNLELLTD 364


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 453 QFECPQEVTCVLELLTD 403
           QFE   ++T  LELLTD
Sbjct: 348 QFEADYKLTRNLELLTD 364


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 236 HGATPTGRVSESWCTNAVS 292
           +GATP+  VS +  ++AVS
Sbjct: 177 NGATPSSLVSSASASSAVS 195


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 432 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 334
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 432 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 334
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,462
Number of Sequences: 438
Number of extensions: 2486
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)