Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N24
(260 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein. 112 2e-25
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (... 112 2e-25
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein. 93 2e-19
X95487-1|CAA64753.1| 133|Homo sapiens clathrin heavy chain poly... 85 3e-17
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly... 85 3e-17
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha... 85 3e-17
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr... 80 1e-15
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr... 80 1e-15
U58033-1|AAC79118.1| 260|Homo sapiens myotubularin related prot... 29 3.6
BC052990-1|AAH52990.1| 643|Homo sapiens myotubularin related pr... 29 3.6
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 29 3.6
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 29 3.6
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 29 3.6
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 29 3.6
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 29 3.6
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 29 3.6
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 29 3.6
AB028996-1|BAA83025.2| 675|Homo sapiens KIAA1073 protein protein. 29 3.6
>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
Length = 1685
Score = 112 bits (270), Expect = 2e-25
Identities = 48/80 (60%), Positives = 62/80 (77%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PDVV+E AWRHNIMDFAMPY IQ ++E TKV+KL+ +++ R E
Sbjct: 1578 ACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQAT 1637
Query: 188 EAKPAIIMEPQLMLTAGPSM 247
E +P + +PQLMLTAGPS+
Sbjct: 1638 ETQPIVYGQPQLMLTAGPSV 1657
>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
protein.
Length = 1675
Score = 112 bits (270), Expect = 2e-25
Identities = 48/80 (60%), Positives = 62/80 (77%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PDVV+E AWRHNIMDFAMPY IQ ++E TKV+KL+ +++ R E
Sbjct: 1568 ACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQAT 1627
Query: 188 EAKPAIIMEPQLMLTAGPSM 247
E +P + +PQLMLTAGPS+
Sbjct: 1628 ETQPIVYGQPQLMLTAGPSV 1647
>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
Length = 1639
Score = 92.7 bits (220), Expect = 2e-19
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PDVV+E AWRHNIMDFAMPY IQ ++E TKV+KL+ +++ R E
Sbjct: 1568 ACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQAT 1627
Query: 188 EAKPAI 205
E +P +
Sbjct: 1628 ETQPIV 1633
>X95487-1|CAA64753.1| 133|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 133
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PD+V+ELAWRHN++D AMPY IQ +RE +KV+KL+ ++ R E
Sbjct: 61 ACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKLDALESLRKQEEHVT 120
Query: 188 EAKPAI 205
E P +
Sbjct: 121 EPAPLV 126
>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 1640
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PD+V+ELAWRHN++D AMPY IQ +RE +KV+KL+ ++ R E
Sbjct: 1568 ACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKLDALESLRKQEEHVT 1627
Query: 188 EAKPAI 205
E P +
Sbjct: 1628 EPAPLV 1633
>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
protein.
Length = 1640
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAED 187
ACL+ CYDLL+PD+V+ELAWRHN++D AMPY IQ +RE +KV+KL+ ++ R E
Sbjct: 1568 ACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKLDALESLRKQEEHVT 1627
Query: 188 EAKPAI 205
E P +
Sbjct: 1628 EPAPLV 1633
>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
protein.
Length = 1569
Score = 79.8 bits (188), Expect = 1e-15
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADA 160
ACL+ CYDLL+PD+V+ELAWRHN++D AMPY IQ +RE +KV+KL+ ++
Sbjct: 1511 ACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKLDALES 1561
>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
protein.
Length = 1626
Score = 79.8 bits (188), Expect = 1e-15
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +2
Query: 8 ACLYQCYDLLKPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADA 160
ACL+ CYDLL+PD+V+ELAWRHN++D AMPY IQ +RE +KV+KL+ ++
Sbjct: 1568 ACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKLDALES 1618
>U58033-1|AAC79118.1| 260|Homo sapiens myotubularin related protein
2 protein.
Length = 260
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 119 ELTTKVEKLEEADAKRSTESAEDEAKPAIIMEP 217
EL KVE+L+ + RST S+E + PA + P
Sbjct: 223 ELQKKVEELQREISNRSTSSSERASSPAQCVTP 255
>BC052990-1|AAH52990.1| 643|Homo sapiens myotubularin related
protein 2 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 119 ELTTKVEKLEEADAKRSTESAEDEAKPAIIMEP 217
EL KVE+L+ + RST S+E + PA + P
Sbjct: 606 ELQKKVEELQREISNRSTSSSERASSPAQCVTP 638
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 423 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 473
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 38 KPDVVIELAWRHNIMDFAMPYLIQTVRELTTKVEKLEEADAKRSTESAEDE 190
K D + E+ HNI D+ P +++ + EL + E A S +EDE
Sbjct: 425 KHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDE 475
>AB028996-1|BAA83025.2| 675|Homo sapiens KIAA1073 protein protein.
Length = 675
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 119 ELTTKVEKLEEADAKRSTESAEDEAKPAIIMEP 217
EL KVE+L+ + RST S+E + PA + P
Sbjct: 638 ELQKKVEELQREISNRSTSSSERASSPAQCVTP 670
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,284,394
Number of Sequences: 237096
Number of extensions: 535799
Number of successful extensions: 1524
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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