Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N23
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 172 5e-44
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 29 0.85
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 1.5
AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical ... 27 3.4
AF040647-10|AAB94993.1| 124|Caenorhabditis elegans Hypothetical... 26 6.0
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 26 7.9
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 26 7.9
U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical pr... 26 7.9
U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical pr... 26 7.9
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 172 bits (419), Expect = 5e-44
Identities = 77/94 (81%), Positives = 86/94 (91%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTN 339
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTN
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTN 94
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 29.1 bits (62), Expect = 0.85
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 37 ISGIF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 150
I IF K+G V+ K +Q +R+Q+KF RE +T Y+
Sbjct: 405 IYSIFYKLGKVEE-KERQIIERFQIKF-HEREDRTRYF 440
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 187 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 306
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 304 VHESRQHRQCDHPQCVSMQLDR*HLYWITVQSVGTLECCICFYPGQRGV-CEHSSQF 137
VH S +H QC HP LD + +++S E C+ G V C+H F
Sbjct: 1084 VHSSIEHLQCPHPYL--NPLDHPQMCITSLKSCSDSETCLKTTSGGNFVCCQHPPSF 1138
>AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical
protein C29G2.5 protein.
Length = 391
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 178 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 270
K+K TP YRL++ L + D+T V S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217
>AF040647-10|AAB94993.1| 124|Caenorhabditis elegans Hypothetical
protein F54D12.2 protein.
Length = 124
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 287 AQTM*SPSMREYAT*QVTSLLDNRTISRYF 198
+ T+ + S +Y++ Q T+L DN+T +YF
Sbjct: 95 SSTLYTQSTDQYSSYQTTTLSDNKTTIQYF 124
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 157 KRLVVQDKNKYNTPKYRLIVRLSN 228
KRL ++K++Y+ P+Y I R N
Sbjct: 635 KRLECEEKDRYSGPRYAKITRSRN 658
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 79 KNKQYFKRYQVKFKRRREGKTDYYARKR 162
KN+Q K YQ++ + R+ K D A R
Sbjct: 1646 KNQQIIKEYQIECEEARQAKEDIAALLR 1673
>U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical
protein C01C4.3a protein.
Length = 356
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 55 KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARK 159
+ GF+K+ ++KQ +R +KF R + K + R+
Sbjct: 23 RFGFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 57
>U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical
protein C01C4.3b protein.
Length = 407
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 55 KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARK 159
+ GF+K+ ++KQ +R +KF R + K + R+
Sbjct: 136 RFGFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,939,610
Number of Sequences: 27780
Number of extensions: 151775
Number of successful extensions: 356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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