Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N20
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 152 4e-37
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 151 6e-37
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 131 7e-31
X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID ... 29 4.0
U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55 pro... 29 4.0
BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,... 29 4.0
AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55 p... 29 4.0
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 28 9.1
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 28 9.1
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 28 9.1
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 28 9.1
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 28 9.1
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 28 9.1
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 152 bits (368), Expect = 4e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 117
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 151 bits (367), Expect = 6e-37
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE V V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
VC+LGDQQHCDEAK +D+P MD E +DA LASESLI
Sbjct: 63 FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLVKKYDAFLASESLI 117
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 131 bits (317), Expect = 7e-31
Identities = 62/102 (60%), Positives = 72/102 (70%)
Frame = +2
Query: 80 AVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCILGDQQHCD 259
+V+ ++ K+RKFLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VC+LGDQQHCD
Sbjct: 5 SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 64
Query: 260 EAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
EAK +D+P MD E +DA LASESLI
Sbjct: 65 EAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 106
>X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID
protein.
Length = 349
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 89 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 226
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 89 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 226
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 55kDa
protein.
Length = 349
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 89 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 226
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 89 QSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQ 226
+ K+K++KF+ + + LKN + +RF T K KYI P ++
Sbjct: 121 KKDKDKEKKFIWNHGITLPLKNV---RKRRFRKTAKKKYIESPDVE 163
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 40 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 99
Query: 212 RPKMQV 229
+ +
Sbjct: 100 HQEKDI 105
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 40 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 99
Query: 212 RPKMQV 229
+ +
Sbjct: 100 HQEKDI 105
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 40 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 99
Query: 212 RPKMQV 229
+ +
Sbjct: 100 HQEKDI 105
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 41 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 100
Query: 212 RPKMQV 229
+ +
Sbjct: 101 HQEKDI 106
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 40 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 99
Query: 212 RPKMQV 229
+ +
Sbjct: 100 HQEKDI 105
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/66 (18%), Positives = 35/66 (53%)
Frame = +2
Query: 32 IKMSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 211
+K K ++ C++ + +++ + F+E + + K+Y P ++ SG++K+++ P
Sbjct: 41 VKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFP 100
Query: 212 RPKMQV 229
+ +
Sbjct: 101 HQEKDI 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,780,827
Number of Sequences: 237096
Number of extensions: 646675
Number of successful extensions: 1275
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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