BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N20
(386 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014654-1|AAT27278.1| 217|Drosophila melanogaster RE06042p pro... 158 3e-39
AE014296-2043|AAF50002.2| 217|Drosophila melanogaster CG7283-PA... 158 3e-39
AY113239-1|AAM29244.1| 216|Drosophila melanogaster AT11516p pro... 107 4e-24
AE014297-1926|AAF55120.1| 216|Drosophila melanogaster CG3843-PA... 107 4e-24
AE014296-2044|AAN12244.1| 57|Drosophila melanogaster CG7283-PB... 92 3e-19
BT001825-1|AAN71580.1| 155|Drosophila melanogaster RH43519p pro... 55 4e-08
BT001758-1|AAN71513.1| 150|Drosophila melanogaster RH06366p pro... 35 0.042
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 27 8.5
>BT014654-1|AAT27278.1| 217|Drosophila melanogaster RE06042p
protein.
Length = 217
Score = 158 bits (383), Expect = 3e-39
Identities = 79/115 (68%), Positives = 88/115 (76%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE VN ++++S +KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPRPK
Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
M+VCILGDQQHCDEAK +V MDAE +DA LASESLI
Sbjct: 63 MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLI 117
>AE014296-2043|AAF50002.2| 217|Drosophila melanogaster CG7283-PA,
isoform A protein.
Length = 217
Score = 158 bits (383), Expect = 3e-39
Identities = 79/115 (68%), Positives = 88/115 (76%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 220
SKVSRDTLYE VN ++++S +KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPRPK
Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
M+VCILGDQQHCDEAK +V MDAE +DA LASESLI
Sbjct: 63 MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLI 117
>AY113239-1|AAM29244.1| 216|Drosophila melanogaster AT11516p
protein.
Length = 216
Score = 107 bits (258), Expect = 4e-24
Identities = 52/116 (44%), Positives = 73/116 (62%)
Frame = +2
Query: 38 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 217
+SKVSRDT+Y V ++ +S+ K LETVELQIGL++YDP K KRF G+V L ++ P
Sbjct: 2 VSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAVP 61
Query: 218 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
+++VC+ GDQ+HC +AK + V C+D E +D LASES+I
Sbjct: 62 QLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESII 117
>AE014297-1926|AAF55120.1| 216|Drosophila melanogaster CG3843-PA
protein.
Length = 216
Score = 107 bits (258), Expect = 4e-24
Identities = 52/116 (44%), Positives = 73/116 (62%)
Frame = +2
Query: 38 MSKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 217
+SKVSRDT+Y V ++ +S+ K LETVELQIGL++YDP K KRF G+V L ++ P
Sbjct: 2 VSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAVP 61
Query: 218 KMQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
+++VC+ GDQ+HC +AK + V C+D E +D LASES+I
Sbjct: 62 QLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESII 117
>AE014296-2044|AAN12244.1| 57|Drosophila melanogaster CG7283-PB,
isoform B protein.
Length = 57
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVK 196
SKVSRDTLYE VN ++++S +KKR FLETVELQIGLKNYDPQKDKRFSGTVK
Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54
>BT001825-1|AAN71580.1| 155|Drosophila melanogaster RH43519p
protein.
Length = 155
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/55 (52%), Positives = 32/55 (58%)
Frame = +2
Query: 221 MQVCILGDQQHCDEAKQLDVPCMDAEXXXXXXXXXXXXXXXXXXFDACLASESLI 385
M+VCILGDQQHCDEAK +V MDAE +DA LASESLI
Sbjct: 1 MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLI 55
>BT001758-1|AAN71513.1| 150|Drosophila melanogaster RH06366p
protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 41 SKVSRDTLYECVNAVIQSSKEKK 109
SKVSRDTLYE VN ++++S +KK
Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKK 25
>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
protein.
Length = 1307
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +2
Query: 77 NAVIQSSKEKKRKFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP-----KMQVCILG 241
NAV QSS E V+LQ G +G + Y RP ++ CI+G
Sbjct: 739 NAVTQSSGGYVVPETEVVDLQ-GHSKPQGGAPTTNAGPTRPHYRQRPTQPPVRIDTCIVG 797
Query: 242 DQQHCDEAK 268
D CD+A+
Sbjct: 798 DDSTCDQAQ 806
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,502,878
Number of Sequences: 53049
Number of extensions: 212737
Number of successful extensions: 598
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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