Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N15
(303 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 128 1e-30
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 128 1e-30
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 128 1e-30
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 122 1e-28
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 29 1.1
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 29 1.1
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 29 1.1
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 29 1.1
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA... 28 2.0
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 2.6
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 27 3.4
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 27 6.0
AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro... 27 6.0
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 27 6.0
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB... 27 6.0
AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p pro... 26 8.0
AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein. 26 8.0
AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA... 26 8.0
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 128 bits (309), Expect = 1e-30
Identities = 60/68 (88%), Positives = 67/68 (98%)
Frame = +2
Query: 14 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 193
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 194 TNIGSGVG 217
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 128 bits (309), Expect = 1e-30
Identities = 60/68 (88%), Positives = 67/68 (98%)
Frame = +2
Query: 14 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 193
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 194 TNIGSGVG 217
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 128 bits (309), Expect = 1e-30
Identities = 60/68 (88%), Positives = 67/68 (98%)
Frame = +2
Query: 14 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 193
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 194 TNIGSGVG 217
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 122 bits (293), Expect = 1e-28
Identities = 58/68 (85%), Positives = 65/68 (95%)
Frame = +2
Query: 14 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 193
M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 194 TNIGSGVG 217
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 213 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 61
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 213 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 61
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 213 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 61
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 213 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 61
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585
>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
protein.
Length = 1201
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 216 PTPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQ 37
PT + IK+ + P+KA ++PG S + AA S + +SSS + A T
Sbjct: 1124 PTKSAVKPIKAGSTSPTKAVVSKPG--ASAAKTAAASAATATATAAGSSSSNKKAATSTA 1181
Query: 36 A 34
A
Sbjct: 1182 A 1182
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 195 VIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEI 94
+I S+ L+P+K N P QY T+ A +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 186 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 58
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 186 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 58
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 186 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEI 94
S+ L+P+K N P QY T+ A +I
Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 186 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 58
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p
protein.
Length = 1052
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 216 PTPDPMLVIK---SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIR 52
P P P+ V+ + T M + + A G STS++++ S S T++SSS+ R
Sbjct: 56 PPPQPIQVVAGSTTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHTR 113
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 186 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 58
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
isoform B protein.
Length = 1052
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 216 PTPDPMLVIK---SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIR 52
P P P+ V+ + T M + + A G STS++++ S S T++SSS+ R
Sbjct: 56 PPPQPIQVVAGSTTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHTR 113
>AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p
protein.
Length = 611
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 153 NRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRA 49
N+ G G+ A S +EI +P A++S+ +IRA
Sbjct: 509 NKNGSSGTGRLDACESKIEIVTPYWASNSAGKIRA 543
>AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein.
Length = 611
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 153 NRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRA 49
N+ G G+ A S +EI +P A++S+ +IRA
Sbjct: 509 NKNGSSGTGRLDACESKIEIVTPYWASNSAGKIRA 543
>AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA
protein.
Length = 611
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 153 NRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRA 49
N+ G G+ A S +EI +P A++S+ +IRA
Sbjct: 509 NKNGSSGTGRLDACESKIEIVTPYWASNSAGKIRA 543
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,292,940
Number of Sequences: 53049
Number of extensions: 182689
Number of successful extensions: 533
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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