Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_N14
         (265 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97014-1|AAB52425.1|  893|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    27   2.4  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        27   2.4  
U39745-3|AAA80445.1|  337|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    27   2.4  
Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z81124-6|CAB03375.1|  335|Caenorhabditis elegans Hypothetical pr...    26   3.2  
AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z81111-3|CAB03267.1|  334|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...    26   4.2  
U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical pr...    25   5.6  
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    25   9.8  
U61954-4|AAK29804.1|  277|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AF098992-11|AAC67462.2|  530|Caenorhabditis elegans Hypothetical...    25   9.8  

>U97014-1|AAB52425.1|  893|Caenorhabditis elegans Hypothetical
           protein T05E8.1 protein.
          Length = 893

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 94  DSHHQDWFLGSWFLDKFNHRSRSLWC 171
           D H + W +GSW  DKF +      C
Sbjct: 803 DKHVKGWQVGSWDQDKFRNNGDEKGC 828


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
           protein F43G9.6 protein.
          Length = 2034

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 94  DSHHQDWFLGSWFLDKFNH 150
           D H + W +GSW  DKF +
Sbjct: 835 DKHAKGWEVGSWAQDKFRN 853


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 94  DSHHQDWFLGSWFLDKFNH 150
           D H + W +GSW  DKF +
Sbjct: 835 DKHAKGWEVGSWAQDKFRN 853


>U39745-3|AAA80445.1|  337|Caenorhabditis elegans Hypothetical
           protein F41C6.4 protein.
          Length = 337

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 13  DRYYIIYSYRFLFSYIILTSFFYRYNGDSHHQDWFLGSWFL 135
           D +  IYSY F+F+    T   + Y+  + H   + G  F+
Sbjct: 276 DLFCSIYSYHFMFNGRTTTVLHFGYDATNRHPYIYFGMPFI 316


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +2

Query: 62  FLLVFFIDIMGIVITRTGFLVLGFLINL----TTDLGHSGARIVQKIHLI*EISLKQK 223
           FLL+  +  + +   +TGF VL F+  +    T D       +V+ +H + E+  + K
Sbjct: 240 FLLLILLCRLSVYTAKTGFPVLNFIFRIFQMTTQDAQEKSINMVELVHELAELLREAK 297


>Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical
           protein F21H7.11 protein.
          Length = 354

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 23  ILYTRIVFYFHI*FLLVFF 79
           I+Y RI+F+++   LLVFF
Sbjct: 149 IIYHRIIFFYNCAILLVFF 167


>Z81124-6|CAB03375.1|  335|Caenorhabditis elegans Hypothetical
           protein T21B4.8 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 7   GIDRYYIIYSYRFLFSYIILTSFFY 81
           G    YII+SY F+FS  I    F+
Sbjct: 199 GFSETYIIFSYVFMFSIAIFEMTFF 223


>AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical
           protein Y43F8A.4 protein.
          Length = 369

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 225 YFCFKLISQMRWIFWTI 175
           +FCF L SQ R  FW+I
Sbjct: 332 FFCFFLSSQYRLAFWSI 348


>Z81111-3|CAB03267.1|  334|Caenorhabditis elegans Hypothetical
           protein T01G5.3 protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 1   ARGIDRYYIIYSYRFLFSYIILTSFFYRY 87
           A GI   + IY Y  LF+  +LT +F  Y
Sbjct: 102 AYGILHSHFIYRYMVLFNRQVLTKYFLPY 130


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 25  IIYSYRFLFSYIILTSFFYRYNGDSHHQ 108
           I+ S + L+ YII++ F+  +  D  HQ
Sbjct: 128 IVKSEKNLYIYIIISDFYNNHTNDLKHQ 155


>U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical
           protein C09B8.4 protein.
          Length = 289

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -2

Query: 246 ISGSQLPYFCFKLISQMRWIFWT-ILAPE*PRSVVKFIKKPRTKKPVLVM 100
           +  S   Y   + I QMR IFWT +  P     V        T KPV++M
Sbjct: 10  LKSSSSTYGGIRNIIQMRNIFWTRVPEPHMKYHVASTKANASTSKPVVLM 59


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 25  IIYSYRFLFSYIILTSFFYRY 87
           +I+ ++ +FS I+ T FFY Y
Sbjct: 239 VIFYFQSIFSCIVTTVFFYFY 259


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 136 DKFNHRSRSLWCKNRPKNPPH 198
           DKF+ ++  +W K++PKNP H
Sbjct: 145 DKFS-QTCFVWEKDKPKNPSH 164


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 8   GLIDIILYTRIVF-YFHI*FLLVFFIDIMGIVITRTGFLVLGFL 136
           GL++I  Y +  + ++   +++VF   +M I+   T F  LGFL
Sbjct: 410 GLMNIASYNKKTYNWYRDVYIIVFLDTLMSILGGITVFSTLGFL 453


>U61954-4|AAK29804.1|  277|Caenorhabditis elegans Hypothetical
           protein F41H10.5 protein.
          Length = 277

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 231 LPYFCFKLISQMRWIFWTI 175
           + +F F+++SQ+ W  W I
Sbjct: 196 ISFFFFRIVSQILWTNWAI 214


>AF098992-11|AAC67462.2|  530|Caenorhabditis elegans Hypothetical
           protein F53C3.12 protein.
          Length = 530

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +1

Query: 91  GDSHHQDWFLGSWFLDKFNHRSRSLWCKNRPKNPPHLRD*FEAE 222
           GD+ +Q WF G  F+ +++     ++   R     + +   EA+
Sbjct: 47  GDTKYQHWFDGMGFIQRYHFEDGKMYYSARYLESENYKKNMEAQ 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,420,914
Number of Sequences: 27780
Number of extensions: 99889
Number of successful extensions: 299
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)