Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N13
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 250 2e-67
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 250 2e-67
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 250 2e-67
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 7e-66
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 150 5e-37
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 150 5e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 4e-34
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 133 6e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 71 3e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 71 3e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 71 3e-13
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 70 8e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 70 8e-13
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 58 3e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 5e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 51 3e-07
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 46 1e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.002
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.035
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.035
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 33 0.11
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.14
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.14
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.14
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.0
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 1.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.1
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 3.1
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 3.1
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 5.4
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 7.1
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 9.4
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 9.4
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 9.4
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 9.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 250 bits (613), Expect = 2e-67
Identities = 116/121 (95%), Positives = 118/121 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 G 413
G
Sbjct: 121 G 121
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 250 bits (613), Expect = 2e-67
Identities = 116/121 (95%), Positives = 118/121 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 G 413
G
Sbjct: 121 G 121
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 250 bits (613), Expect = 2e-67
Identities = 116/121 (95%), Positives = 118/121 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGT 410
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 411 G 413
G
Sbjct: 121 G 121
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (601), Expect = 7e-66
Identities = 113/116 (97%), Positives = 115/116 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 150 bits (363), Expect = 5e-37
Identities = 67/118 (56%), Positives = 88/118 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V+ TG
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 284
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 150 bits (363), Expect = 5e-37
Identities = 67/118 (56%), Positives = 88/118 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V+ TG
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 302
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 4e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAER 251
DKLK +
Sbjct: 61 DKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 133 bits (321), Expect = 6e-32
Identities = 59/120 (49%), Positives = 84/120 (70%)
Frame = +3
Query: 54 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL++ G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 70.9 bits (166), Expect = 3e-13
Identities = 41/114 (35%), Positives = 59/114 (51%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVV 143
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 70.9 bits (166), Expect = 3e-13
Identities = 41/114 (35%), Positives = 59/114 (51%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVV 144
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 70.9 bits (166), Expect = 3e-13
Identities = 41/114 (35%), Positives = 59/114 (51%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVV 144
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.7 bits (163), Expect = 8e-13
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVI 139
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.7 bits (163), Expect = 8e-13
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVI 139
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 58.0 bits (134), Expect = 3e-09
Identities = 40/113 (35%), Positives = 54/113 (47%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
RGIT+ A + + + +ID PGH DF + D V+++D G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 53.6 bits (123), Expect = 5e-08
Identities = 36/108 (33%), Positives = 51/108 (47%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
RGITI A + + IID PGH DF + D AVL++
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL 143
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 51.2 bits (117), Expect = 3e-07
Identities = 35/113 (30%), Positives = 50/113 (44%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
RGIT+ Y + +ID PGH DF + + D +L+V G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.6 bits (103), Expect = 1e-05
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERGI----TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 396 VDDGTG 413
VD +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 45.2 bits (102), Expect = 2e-05
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 396 VDDGTG 413
VD +G
Sbjct: 141 VDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 39.9 bits (89), Expect = 7e-04
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVD 401
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++D
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLID 115
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 39.9 bits (89), Expect = 7e-04
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVD 401
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++D
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLID 115
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 34.3 bits (75), Expect(2) = 0.002
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 198 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 374
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 375 ADCAVLIV--DDG 407
AD VL+V DDG
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 0.002
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 IVVIGHVDSGKST 116
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.035
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
+ + I + Y + IID PGH +F M AD V++VD G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.035
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVDDGTG 413
+ + I + Y + IID PGH +F M AD V++VD G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 282 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVDDGT 410
++ E G+ V IID+ G RDFI KN+ GT+ A V DD +
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDAS 108
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 137
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 315 IIDAPGHRDFIKNMITGTSQADCAVLIVD 401
IID PGH F G+S D A+L+VD
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVVD 581
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 137
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.3 bits (65), Expect = 0.58
Identities = 24/110 (21%), Positives = 48/110 (43%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 251
+N+ ++GHVDSGK+T T + + + F+ A R
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA------ELGSTSAFDAHATSTTTDGI------------R 55
Query: 252 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVD 401
+ + + +G+ + +ID PGH I+ ++ ++ D A++I+D
Sbjct: 56 RNTLDLGFSTMTSLSGRR-LALIDCPGHSGLIRAVLAASTVFDMAIVIID 104
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 329 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 240
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.5 bits (63), Expect = 1.0
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Frame = +3
Query: 27 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMG 200
+++R P+ ++ + + + V+G D GKST G L C G K I F + E+
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVR 212
Query: 201 KGSFKYAWVLDKLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITG- 365
G K + V + + RG ++ A E VT+ID G + K I G
Sbjct: 213 TG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGL 270
Query: 366 ---TSQADCAVLIVDDG 407
T C V+ D G
Sbjct: 271 TGYTPHFACLVVAADRG 287
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 306 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
+V+ +D PGH + M+ G + D A L+V
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV 158
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 33 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 203
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 103 PASPQQLVT*STNAVVSTNVPSKSS 177
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 361
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 361
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,777,535
Number of Sequences: 27780
Number of extensions: 197557
Number of successful extensions: 673
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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