Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N12
(396 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 211 2e-55
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 211 2e-55
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 211 2e-55
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 211 2e-55
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 211 2e-55
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 207 4e-54
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 173 7e-44
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 173 7e-44
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 146 1e-35
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 146 1e-35
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 38 0.004
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 38 0.004
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 36 0.015
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 36 0.015
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 0.97
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (516), Expect = 2e-55
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 110
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (516), Expect = 2e-55
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 110
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (516), Expect = 2e-55
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 110
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (516), Expect = 2e-55
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 110
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 211 bits (516), Expect = 2e-55
Identities = 95/110 (86%), Positives = 103/110 (93%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 110
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 207 bits (506), Expect = 4e-54
Identities = 93/108 (86%), Positives = 101/108 (93%)
Frame = +3
Query: 51 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 230
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 231 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+S L+
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLA 113
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 173 bits (421), Expect = 7e-44
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 109
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 173 bits (421), Expect = 7e-44
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = +3
Query: 45 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 224
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 225 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 109
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 146 bits (353), Expect = 1e-35
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = +3
Query: 138 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 317
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 318 RKRKSVRGCIVDANLSDLS 374
RKRKSVRGCIVDAN+S L+
Sbjct: 61 RKRKSVRGCIVDANMSVLA 79
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 146 bits (353), Expect = 1e-35
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = +3
Query: 138 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 317
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 318 RKRKSVRGCIVDANLSDLS 374
RKRKSVRGCIVDAN+S L+
Sbjct: 61 RKRKSVRGCIVDANMSVLA 79
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 252 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
N R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 44
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 252 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
N R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 44
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 258 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 58
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 258 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSDLS 374
R+RLL K HSC+ PR + RK K+VR V+AN+S L+
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALT 56
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 0.97
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 222 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 91
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,549,622
Number of Sequences: 53049
Number of extensions: 361949
Number of successful extensions: 825
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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