Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N10
(297 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 179 7e-47
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 176 7e-46
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 165 2e-42
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 161 2e-41
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 149 9e-38
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 79 1e-16
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 66 8e-13
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 44 4e-06
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.11
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.11
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 28 0.34
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 28 0.34
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 27 0.78
SPBC800.06 |brx1||ribosome biogenesis protein Brx1|Schizosacchar... 27 0.78
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 27 0.78
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar... 27 0.78
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 1.0
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 1.4
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 1.8
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 25 1.8
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 2.4
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 25 2.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 2.4
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 25 3.1
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 24 4.2
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 24 4.2
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 23 7.3
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 23 7.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 23 7.3
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 23 9.6
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 23 9.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 23 9.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 23 9.6
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 23 9.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 23 9.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 179 bits (436), Expect = 7e-47
Identities = 83/96 (86%), Positives = 91/96 (94%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGG
Sbjct: 142 VTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGG 201
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 296
TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VN
Sbjct: 202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 176 bits (428), Expect = 7e-46
Identities = 82/96 (85%), Positives = 90/96 (93%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGG
Sbjct: 142 VTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGG 201
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 296
TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VN
Sbjct: 202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 165 bits (400), Expect = 2e-42
Identities = 72/96 (75%), Positives = 92/96 (95%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGG
Sbjct: 175 VTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGG 233
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 296
TFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N
Sbjct: 234 TFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVIN 269
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 161 bits (391), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
ITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGG
Sbjct: 146 ITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGG 205
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 293
TFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V
Sbjct: 206 TFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALV 240
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 149 bits (361), Expect = 9e-38
Identities = 69/95 (72%), Positives = 82/95 (86%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGG
Sbjct: 188 VTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGG 245
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 293
TFD+SIL + +G+FEV+ST GDTHLGGEDFD +V
Sbjct: 246 TFDISILELNNGVFEVRSTNGDTHLGGEDFDVALV 280
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 79.4 bits (187), Expect = 1e-16
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFD 176
I++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D
Sbjct: 146 ISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVD 205
Query: 177 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 296
G + VSI+ G F +KST D +LG + D +++
Sbjct: 206 FGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALID 245
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 66.5 bits (155), Expect = 8e-13
Identities = 29/96 (30%), Positives = 60/96 (62%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG 188
++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 168 MSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGAT 227
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 296
+VS+++++ G+ + ++ D +LGGE + +VN
Sbjct: 228 RSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVN 263
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 44.4 bits (100), Expect = 4e-06
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 9 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGG 185
+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G
Sbjct: 165 LTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGS 224
Query: 186 GTFDVSILTIE 218
G+ ++++ +
Sbjct: 225 GSTSATVISFD 235
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 29.5 bits (63), Expect = 0.11
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 280 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPP 179
S SS C PA++FTS+I + + ++ + P P
Sbjct: 178 SASSVISCTPPAINFTSDICNEQIELEYKRKPIP 211
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.11
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 280 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLS 134
+ S PP P + +IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 27.9 bits (59), Expect = 0.34
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = -3
Query: 268 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIAAAVGSLIIR 89
PPK VS + SN P V D+ P P S F P P PY I AA L +R
Sbjct: 123 PPKRVSLGIPSISNPPVDTVISDSPTSPHPPS----FVQPHP----PYGIFAA-PILDVR 173
Query: 88 RTFRPEMVPASFVACL 41
P V ++ CL
Sbjct: 174 VLTNPGAVKRTYNLCL 189
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 0.34
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 145 PFLSRPYAIAAAVGSLIIRRTFRP 74
P PYA+A+ GSL+ R FRP
Sbjct: 272 PSAQGPYALASNYGSLLARIVFRP 295
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 235 TSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPY 125
TSN P VR + VP S + + P + RPY
Sbjct: 199 TSNCPPKYVRSTINCVPTTNSLLKKSKIPFALVIRPY 235
>SPBC800.06 |brx1||ribosome biogenesis protein
Brx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 0.78
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -2
Query: 233 FEYTILDGQDGHIEGAAAEVKDEYVSFSSTLLVKAVRNRSSCRFIDNTKN 84
F TI++ +G G D +VS ST++ A+RN+++ R+++ ++
Sbjct: 225 FVMTIINILEGSFGGPVIYKNDTFVS--STMVRAAIRNQAAQRYVNRQES 272
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 26.6 bits (56), Expect = 0.78
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -3
Query: 268 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIAAAVGSLIIR 89
PP S P V VP P S S R P+L I+ + G+LI++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 88 RTFRPEMVPASF 53
+ ++ +F
Sbjct: 474 NHNQLSLLKCTF 485
>SPBC19C7.08c |||leucine carboxyl
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 0.78
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 35 LSKAGHERCGYHLWSECSSYYQ 100
LSKA E+CGY ++ SYYQ
Sbjct: 25 LSKASVEKCGYPGFTVGHSYYQ 46
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 1.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 280 SKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSK 170
+KSSP K VSP V S +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 132 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 284
LDK G+ I GG T SIL +GI VK E F+N
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNN 98
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 256 VSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVP 143
V+ D +++P + + T + PPR K + +P+P
Sbjct: 71 VNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPATPIP 108
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 286 RLSKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVP 143
+ S S+P SPA + +++P V +S V S T + P
Sbjct: 76 KTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAP 123
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 189 TFDVSILTIEDGIFEVKSTAGDTHL 263
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
Score = 24.2 bits (50), Expect = 4.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 250 PAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRS 152
P+V FT + ++R+ S +PPP + T S
Sbjct: 378 PSVMFTMRYLALILRVQNSNMPPPAPRPVTNNS 410
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 25.0 bits (52), Expect = 2.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 230 EYTILDGQDGHIEGAAAEVKDEYVSFSSTLLVKAVRNRSSCRFIDNTKNIQTRDGTRIFR 51
E TI +GQ+G + A KD+ V +S + R+ + R I K + D I +
Sbjct: 383 EETISNGQNGIVASAETSKKDDGVQSASLNASMSARSHARQRSIHVPKTRKDTDYESIHQ 442
Query: 50 GL 45
L
Sbjct: 443 KL 444
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 144 PSCQGRTQSQQLSVH**YEEHSDQRWYPH 58
P+ GRTQ Q Y +SD YPH
Sbjct: 674 PTYGGRTQDQSYPRQNGYPSYSDGNVYPH 702
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 24.6 bits (51), Expect = 3.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 65 YHLWSECSSYY 97
YHLW +C+ Y+
Sbjct: 377 YHLWKDCNPYF 387
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 24.2 bits (50), Expect = 4.2
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 160 FRSPVPFLSRPYAIAAAVG-SLIIRRTFRPEM 68
FRS PFL + A A V ++++ +T+ P +
Sbjct: 47 FRSAPPFLFKSAAFGAIVAYAIVLYKTYSPNL 78
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 24.2 bits (50), Expect = 4.2
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -3
Query: 268 PPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRS--KMSTFRSPVPFLSRPYAIAAAVGSLI 95
PP P + S I + M M + PPP + + + F Y AAA
Sbjct: 80 PPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPPAYPEAAATSDAA 139
Query: 94 IRR 86
R+
Sbjct: 140 FRK 142
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 274 SSPPKCVSPAVDFTSNIPSSMVRMDTSKV 188
S PK S ++DF SN +SM++ + K+
Sbjct: 65 SENPK-TSASIDFDSNFLNSMIKKNEEKL 92
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 223 PSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIAAAVGSL 98
PS+ + + SKV P + +T +P + A AAA +L
Sbjct: 343 PSTPLSVSNSKVASPETPNATHTAPKVEMRYASAAAAAAAAL 384
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 190 VPPPRSKMSTFRSPVPFLSRPYAIA 116
VP R+ SP PFLSR I+
Sbjct: 522 VPVERNSFRETESPKPFLSRQIGIS 546
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 23.0 bits (47), Expect = 9.6
Identities = 6/18 (33%), Positives = 14/18 (77%)
Frame = +3
Query: 228 FEVKSTAGDTHLGGEDFD 281
++++ AG+ HL G++F+
Sbjct: 1285 WKIREEAGEAHLAGKEFE 1302
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 279 RSPLLPNACRRRSTSLRIYHPRWSGWT 199
+SP + A RST++R HP + +T
Sbjct: 481 QSPNIDTAISNRSTNVRHGHPGFKDYT 507
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 23.0 bits (47), Expect = 9.6
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -3
Query: 235 TSNIPS--SMVRMDTSKVPPPRSKMSTFRSP--VPFLSRPYAIAAAVGSLIIRRTFRPEM 68
TSN+P+ + R S PPP S ST P P L P ++ SL +++T +
Sbjct: 403 TSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLP-PRGLSEDNDSLSLQKTGSSDT 461
Query: 67 VPASF 53
+SF
Sbjct: 462 RRSSF 466
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 23.0 bits (47), Expect = 9.6
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -3
Query: 292 TMRLSKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSP 149
T S PP S +S +PS+ TS PP +T +P
Sbjct: 310 TSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTP 357
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 18 PAYFNDSQRQATKDAGTIS 74
P + N+S Q +KD G+IS
Sbjct: 556 PIHHNESLNQLSKDLGSIS 574
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 23.0 bits (47), Expect = 9.6
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = -3
Query: 286 RLSKSSPPKCVSPAVDFTSNIPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRP 128
R +KS+ P + +PS + + S PP K RS + S P
Sbjct: 256 RRTKSATPSLEQFNEPYKQTLPSHSIEFEDSFFQPPSQKGHMQRSFLTTFSAP 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,234,871
Number of Sequences: 5004
Number of extensions: 21177
Number of successful extensions: 110
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 73880280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -