Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_N10
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   1.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   3.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   4.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   4.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   4.2  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    20   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.8  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 39  QRQATKDAGTISGLNVLRIINEPTAAAIAYG 131
           Q +A K A  +   N   II+EPT     YG
Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 200 HIEGAAAEVKDEYVSFSSTLLVKAVRN 120
           H  G+   VKDEY+   S  + K V +
Sbjct: 363 HFVGSNKPVKDEYMLVLSNRMQKIVND 389


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +3

Query: 78  LNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDV 200
           LN+  I   P+     Y +      + N+L  DL  G  ++
Sbjct: 787 LNISDIALYPSQTTHGYDIYASSIDKENILFLDLSTGKVEM 827



 Score = 19.4 bits (38), Expect = 9.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 120 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 221
           I   +D   TG        +GG T D+S L +++
Sbjct: 460 IIKNVDYADTGAYMCQASSIGGITRDISSLVVQE 493


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  TKNIQTRDGTRIFRG 48
           ++ +++ DGT +FRG
Sbjct: 100 SEKLESSDGTSLFRG 114


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 108 TAAAIAYGLDKKGTG 152
           +A   AYG  K GTG
Sbjct: 25  SALGAAYGTAKSGTG 39


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 150 GERNVLIFDLGGGTFDVSILTIEDG 224
           GER  L   +  G   +SI  ++DG
Sbjct: 625 GERTTLTCSVTRGDLPLSISWLKDG 649


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,448
Number of Sequences: 438
Number of extensions: 1533
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)