Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N05
(293 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 1.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 2.4
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 20 5.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 5.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 5.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 5.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 5.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 5.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 5.5
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 20 5.5
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 20 7.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 9.6
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.2 bits (45), Expect = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 154 NGKKIAVFSERDPHAIPWGQAGAEYVVESTG 246
N KK+ +PH IP Q +E++ ++TG
Sbjct: 262 NFKKMQEEKIFEPHRIPQLQEVSEFLKKNTG 292
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 2.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 19 RGGADVVAINDPFIGL--DYMVYLFQYDSTH-GRFKGTVEAVDGHLVVNGKKIAVFSERD 189
R GAD+ +N+P I + D +YL + H G + T AV VV + + + +
Sbjct: 346 RNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNY--TCHAVRNQDVVQTHVLTIHTIPE 403
Query: 190 PHAIPWGQA 216
P QA
Sbjct: 404 VKVTPRFQA 412
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 20.2 bits (40), Expect = 5.5
Identities = 11/53 (20%), Positives = 27/53 (50%)
Frame = -3
Query: 237 FNNVFSTSLTPWNSMGIPLREHSYLLSVYDEVSIYGLNGTLETTVSRIILEKV 79
FN + ++ WNS+ E+ +++ +DE I+ + + + II +++
Sbjct: 330 FNLIDQNAVGCWNSLLPYSPENQAVVARHDEAMIFPADVKINRGLXWIISDRM 382
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHN 257
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHN 257
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHN 257
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHN 257
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 217 SSHYSRERSCSRDRNREYRKKDRRYEKLHN 246
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 100 SNHTGKGRPCSQDQ*KDH**QQHRHPLVPN 11
S+H + R CS+D+ +++ + R+ + N
Sbjct: 228 SSHYSRERSCSRDRNREYKEKDRRYEKLHN 257
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 20.2 bits (40), Expect = 5.5
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 IPMLFHGVRLVLNTLLNQPVCSQPLIKLLLTW-WVE 292
I M F+GV LN + N+ PL+ W W +
Sbjct: 77 IIMKFNGVPSSLNVITNKTGNGGPLLAPYPDWTWAK 112
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 19.8 bits (39), Expect = 7.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 136 DGHLVVNGKKIAVFSE 183
DG++ V +K+ +FSE
Sbjct: 49 DGNIDVEDEKVQLFSE 64
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.4 bits (38), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 151 VNGKKIAVFSERDPH 195
+ GK IAV ++ PH
Sbjct: 1089 IGGKPIAVQIQQSPH 1103
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,946
Number of Sequences: 438
Number of extensions: 1631
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5994288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -