Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_N04
         (291 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   3.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   4.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   7.1  
AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    21   9.4  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    21   9.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   9.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 70  ICLTKCYIIRFS 105
           IC+ KCY + FS
Sbjct: 810 ICIEKCYCVSFS 821


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 280 SKLDICSPQSDMWMCFG 230
           SKL+ CSPQ     CFG
Sbjct: 180 SKLN-CSPQCSQGRCFG 195


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 263 FASI*HVDVFWFVEIIC 213
           F S  H D +W +++ C
Sbjct: 795 FTSNLHTDFYWLMKVAC 811


>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 162 VDRKYCRQPNIFHKEKKFEREPYY 91
           +D KY  +P ++  ++  E+ P Y
Sbjct: 18  MDEKYFPEPEVYMPQRFDEQAPNY 41


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 76  LTKCYIIRFSLKLFLLVENIWL 141
           LT   II    K  LLV NIWL
Sbjct: 70  LTLMQIIDVDEKNQLLVTNIWL 91


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 288 LLTPSWIFVRLNLTCGCV 235
           L+TP  + V L+   GCV
Sbjct: 57  LMTPCMVIVMLSYIFGCV 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,954
Number of Sequences: 2352
Number of extensions: 6769
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)