Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_N04
         (291 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical p...    32   0.060
Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical p...    32   0.060
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    30   0.24 
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    30   0.24 
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr...    30   0.32 
Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical pr...    28   1.3  
Z78544-3|CAB01760.1|  395|Caenorhabditis elegans Hypothetical pr...    27   1.7  
AL031621-3|CAA20935.2|  740|Caenorhabditis elegans Hypothetical ...    27   1.7  
U10438-6|AAA19087.1|  429|Caenorhabditis elegans Hypothetical pr...    27   3.0  
Z75952-4|CAB00094.2|  303|Caenorhabditis elegans Hypothetical pr...    26   5.2  
AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    26   5.2  
AF016420-6|AAB65311.3|  530|Caenorhabditis elegans Udp-glucurono...    26   5.2  
U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine rece...    25   6.8  
AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical ...    25   6.8  
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr...    25   9.1  
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr...    25   9.1  
Z75554-4|CAA99957.2|  534|Caenorhabditis elegans Hypothetical pr...    25   9.1  
U41007-1|AAA82264.1|  326|Caenorhabditis elegans Hypothetical pr...    25   9.1  
AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine re...    25   9.1  
AF022967-2|AAB69880.1|  305|Caenorhabditis elegans Hypothetical ...    25   9.1  

>Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 32.3 bits (70), Expect = 0.060
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +3

Query: 96  TVLSQTFSPCGKYLVAGNIYGQLAVFDL 179
           ++++  FSPCG+Y+V+ +  G L ++DL
Sbjct: 521 SIIAVKFSPCGRYIVSLDAIGNLMIWDL 548


>Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 32.3 bits (70), Expect = 0.060
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +3

Query: 96  TVLSQTFSPCGKYLVAGNIYGQLAVFDL 179
           ++++  FSPCG+Y+V+ +  G L ++DL
Sbjct: 521 SIIAVKFSPCGRYIVSLDAIGNLMIWDL 548


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 30.3 bits (65), Expect = 0.24
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +3

Query: 99  VLSQTFSPCGKYLVAGNIYGQLAVFDLDRILHPVL*RITNDFNKP-KHIHMSD*GEQISS 275
           VL+  +SP GKYL +G+I  ++ +++  ++  P    + ND   P K +     G+ ++S
Sbjct: 136 VLTVEWSPNGKYLASGSIDYRIIIYNARKL--PDRITVLNDIQLPVKGLSWDPIGKYLAS 193

Query: 276 LE 281
           LE
Sbjct: 194 LE 195


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 30.3 bits (65), Expect = 0.24
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +3

Query: 99  VLSQTFSPCGKYLVAGNIYGQLAVFDLDRILHPVL*RITNDFNKP-KHIHMSD*GEQISS 275
           VL+  +SP GKYL +G+I  ++ +++  ++  P    + ND   P K +     G+ ++S
Sbjct: 424 VLTVEWSPNGKYLASGSIDYRIIIYNARKL--PDRITVLNDIQLPVKGLSWDPIGKYLAS 481

Query: 276 LE 281
           LE
Sbjct: 482 LE 483


>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical
           protein F17C11.10 protein.
          Length = 1101

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 117 SPCGKYLVAGNIYGQLAVFDLDRI 188
           SPCGKYL +  +  Q+AV++ D +
Sbjct: 254 SPCGKYLASSTMDNQIAVWNSDEL 277


>Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical
           protein C14B1.4 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 96  TVLSQTFSPCGKYLVAGNIYGQLAVFDLDRIL 191
           ++ S  FSPCGKYL   +    + ++++D ++
Sbjct: 89  SISSAKFSPCGKYLGTSSADKTVKIWNMDHMI 120



 Score = 26.6 bits (56), Expect = 3.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 114 FSPCGKYLVAGNIYGQLAVFDLDR 185
           FSP GKY++A N+   L ++D  +
Sbjct: 264 FSPNGKYILASNLDSTLKLWDFSK 287


>Z78544-3|CAB01760.1|  395|Caenorhabditis elegans Hypothetical
           protein K04G11.4 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 114 FSPCGKYLVAGNIYGQLAVFDLDRI 188
           FSP GKY++A N+   L ++D  ++
Sbjct: 283 FSPNGKYILASNLNNTLKLWDYQKL 307


>AL031621-3|CAA20935.2|  740|Caenorhabditis elegans Hypothetical
           protein F28H6.6 protein.
          Length = 740

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 168 QQVDRKYCRQPNIFHKEKKFEREPY 94
           QQ  +K C+QP    KE+ FE   Y
Sbjct: 465 QQTQQKTCKQPQSVSKEQMFESPEY 489


>U10438-6|AAA19087.1|  429|Caenorhabditis elegans Hypothetical
           protein B0280.9 protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 FSPCGKYLVAGNIYGQLAVFDL 179
           FSP G Y+  GN  G+L VF++
Sbjct: 402 FSPNGGYMAVGNDDGRLHVFEI 423


>Z75952-4|CAB00094.2|  303|Caenorhabditis elegans Hypothetical
           protein F29D10.3 protein.
          Length = 303

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 103 SLKLFLLVENIWLPAIFTVNLLFLI*IVSYTQSYN 207
           SLK+FL +    LP + T NL  ++ +   T  YN
Sbjct: 17  SLKMFLFLLIFVLPRLITANLKMMV-VYGETDEYN 50


>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 85  CYIIRFSLKLFLLVENIWLPAIFTVNLLFLI*IVSYTQSYNV 210
           C +IRF     L+V  I    IF   L++ I ++ ++QS+++
Sbjct: 608 CRVIRFVGPFVLMVYTIIATDIFRFMLIYGIFLMGFSQSFSL 649


>AF016420-6|AAB65311.3|  530|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein7 protein.
          Length = 530

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 24  LKYFILHYIWISTIINMLDKMLYNTVLSQTFSPCGKYL 137
           L++  L      ++  ML    ++ +L++ F PCG YL
Sbjct: 118 LEHMCLQVFEDKSLHTMLKSEHFDVLLAEPFDPCGLYL 155


>U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 8 protein.
          Length = 300

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  TRVKIEIFYITLHLDINYNKYA 76
           TR K+ +F+  L LD+ YN +A
Sbjct: 42  TRHKMILFFYRLFLDVTYNVFA 63


>AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical
           protein Y39H10A.6 protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 135 LVAGNIYGQLAVFDLDRILH 194
           +VAGN +G + VFDL R  H
Sbjct: 372 VVAGNEFGAMKVFDLSRGEH 391


>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical protein
            F45H11.4 protein.
          Length = 1243

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -2

Query: 140  NQIFSTRRKSLRENRII*HFVKHIYYS*YPNVM 42
            NQI  T R++L E ++  H+ + ++Y  YP+++
Sbjct: 1173 NQI-KTLREALSEAQMRLHYYEPVFYQAYPSIV 1204


>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical protein
            F45H11.4 protein.
          Length = 1243

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -2

Query: 140  NQIFSTRRKSLRENRII*HFVKHIYYS*YPNVM 42
            NQI  T R++L E ++  H+ + ++Y  YP+++
Sbjct: 1173 NQI-KTLREALSEAQMRLHYYEPVFYQAYPSIV 1204


>Z75554-4|CAA99957.2|  534|Caenorhabditis elegans Hypothetical
           protein ZC455.6a protein.
          Length = 534

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 90  YNTVLSQTFSPCGKYLVAG-NIYGQLAVFDLDRILHPVL*RITNDFNKPKHIH 245
           ++ VLS+TF  CG YL     +   ++VF  +R     L  ITN   +P  +H
Sbjct: 144 FDVVLSETFDFCGLYLADYLEMPAIISVFTGNR-----LNAITNALGEPSFLH 191


>U41007-1|AAA82264.1|  326|Caenorhabditis elegans Hypothetical
           protein C33H5.7 protein.
          Length = 326

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 114 FSPCGKYLVAGNIYGQLAVFD 176
           FSPCGKY++      QL + D
Sbjct: 208 FSPCGKYIMICTNSSQLLLVD 228


>AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine
           receptor, class v protein19 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 263 FASI*HVDVFWFVEIICY 210
           FA++ +  VFWF+ I CY
Sbjct: 98  FAAVAYDGVFWFIIIRCY 115


>AF022967-2|AAB69880.1|  305|Caenorhabditis elegans Hypothetical
           protein C13A2.9 protein.
          Length = 305

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -1

Query: 222 NHLLYVIRLGVGYDLDQKQQVDRKYCRQPNI-FH 124
           N LL ++ LG+G+D+  + ++   Y   PNI FH
Sbjct: 109 NELLTMVTLGIGHDIKAELKLKELY---PNIDFH 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,280,244
Number of Sequences: 27780
Number of extensions: 141607
Number of successful extensions: 298
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)