Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_N03
(376 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 30 0.62
Z66564-3|CAA91475.1| 284|Caenorhabditis elegans Hypothetical pr... 29 1.1
U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical p... 29 1.4
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 29 1.4
U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical p... 29 1.4
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 4.4
U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical p... 27 5.8
Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical pr... 26 7.6
U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective fasci... 26 7.6
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 26 7.6
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 26 7.6
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 26 7.6
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 7.6
AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormo... 26 7.6
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 7.6
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 26 7.6
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 26 7.6
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 26 7.6
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 26 7.6
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 29.9 bits (64), Expect = 0.62
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 54 TRVCVQCPLSSNIGLILDAVAHKSCV 131
T++CV CPL++ I + V KSCV
Sbjct: 621 TKLCVSCPLNTIINVTSSRVGVKSCV 646
>Z66564-3|CAA91475.1| 284|Caenorhabditis elegans Hypothetical
protein F52D10.4 protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 189 SHWAPANIGPYSQAIKVGEIIGTCVS-EXXASTAVNYEALVEV 314
S WA A GPYS + +G IIG S + S ++N LV +
Sbjct: 10 SSWALAFDGPYSFVVIIGGIIGNVYSLKQLFSRSINTSMLVSL 52
>U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical
protein C23G10.2c protein.
Length = 137
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 159 ERVTMHVQGISHWAPANIGPYSQAIKVGEII 251
++VT + ++ AP IGPYSQA++ G I
Sbjct: 3 QKVTRQIISSAN-APGAIGPYSQAVRAGNTI 32
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 159 ERVTMHVQGISHWAPANIGPYSQAIKVGEII 251
++VT + ++ AP IGPYSQA++ G I
Sbjct: 37 QKVTRQIISSAN-APGAIGPYSQAVRAGNTI 66
>U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical
protein C23G10.2b protein.
Length = 144
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 159 ERVTMHVQGISHWAPANIGPYSQAIKVGEII 251
++VT + ++ AP IGPYSQA++ G I
Sbjct: 10 QKVTRQIISSAN-APGAIGPYSQAVRAGNTI 39
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 296 IVHRGTSAXF*HARAYNFPHLNSLTIRSDISRCP 195
I + + F ++ A+NFP N++ I IS CP
Sbjct: 221 IYNENRTKAFVNSNAFNFPDQNNVRISCKISVCP 254
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 129 VDHKSENNEKERVTMHVQGISHWAPANIGPYSQAIKVGEIIGTCVS 266
VD K N V HV ++ WA N GP I + ++G V+
Sbjct: 1299 VDSKWINISCHVVDCHVLKLTAWAVCNTGPIGAQIVLITVLGVLVN 1344
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 129 VDHKSENNEKERVTMHVQGISHWAPANIGPYSQAIKVGEIIGTCVS 266
VD K N V HV ++ WA N GP I + ++G V+
Sbjct: 1299 VDSKWINISCHVVDCHVLKLTAWAVCNTGPIGAQIVLITVLGVLVN 1344
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 78 LSSNIGLILDAVAHKSCVDHKSENNEKERVTMHVQGISHWAPANIGPYSQA 230
++ N+G + +++H++ + S NE R M+ G H+A N GP +++
Sbjct: 2467 MNQNMGGMNQSMSHQAPPPYSS-TNEMNRPLMNQYGGPHFAAPNPGPLNRS 2516
>U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical
protein F07C4.11 protein.
Length = 97
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 21 YVNTFCHPNPPTRVCVQCPLSSNIGLILDAVAHKSCVDHKSENN 152
+VN +C + C +CP ++ + AVA SC + ++++
Sbjct: 26 FVNQYCQ-----KTCARCPSTTAASALAAAVAASSCTTYAADSS 64
>Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical
protein R01E6.6 protein.
Length = 311
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 117 HKSCVDHKSENNEK------ERVTMHVQGISHWAPAN 209
H+S VD + ENNE+ V +H+ H PAN
Sbjct: 250 HQSTVDSREENNEQTPGEIHSEVCLHIPLSPHHIPAN 286
>U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective
fasciculation of axonsprotein 1 protein.
Length = 419
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 328 PPRDHTSTNAS*FTAVLAXYSDTHVPIISPTLIA*L*GPILAG 200
PP DHT+ + + F ++ + +D+ SPTL + G + +G
Sbjct: 69 PPLDHTTISVNSFPSMGSVKTDSPPTASSPTLCCAVCGDVSSG 111
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1672 QTSVRQKWQQAASSAKWIGIGKRLN 1696
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1653 QTSVRQKWQQAASSAKWIGIGKRLN 1677
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1709 QTSVRQKWQQAASSAKWIGIGKRLN 1733
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1663 QTSVRQKWQQAASSAKWIGIGKRLN 1687
>AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormone
receptor FAX-1 protein.
Length = 419
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 328 PPRDHTSTNAS*FTAVLAXYSDTHVPIISPTLIA*L*GPILAG 200
PP DHT+ + + F ++ + +D+ SPTL + G + +G
Sbjct: 69 PPLDHTTISVNSFPSMGSVKTDSPPTASSPTLCCAVCGDVSSG 111
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1663 QTSVRQKWQQAASSAKWIGIGKRLN 1687
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1672 QTSVRQKWQQAASSAKWIGIGKRLN 1696
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1663 QTSVRQKWQQAASSAKWIGIGKRLN 1687
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1653 QTSVRQKWQQAASSAKWIGIGKRLN 1677
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 98 QTDVRGKWTLNTDPRRWIRVTERVN 24
QT VR KW +WI + +R+N
Sbjct: 1709 QTSVRQKWQQAASSAKWIGIGKRLN 1733
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,003,789
Number of Sequences: 27780
Number of extensions: 147674
Number of successful extensions: 370
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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