Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_M24
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.71 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   2.2  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   5.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   8.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -3

Query: 384 RQRSFAASHNGMSVCSCRSRHSLCAGSPPGLRFKSYLRARRGPGHRLLIRVTRSTLTSS 208
           RQ+  A +   + V   +S+  L   SPP     S  +A + P    L+  T STL  S
Sbjct: 651 RQKDSAEAEPAVIVQHTQSQLHLHLTSPPARSPSSQAQASQCPQTASLLSSTHSTLARS 709


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 79  VLYQLGKNIDPLIYNELMTDLAKKFE 156
           V Y L   ++PL+YN +     + F+
Sbjct: 335 VFYYLSTTVNPLLYNIMSNKFREAFK 360


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 82  LYQLGKNIDPLIYNELMTDLAKKFEE 159
           LY     I+P++YN +       F+E
Sbjct: 304 LYYFSTTINPILYNVMSAKYRNAFKE 329


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 306 SPPGLRFKSYLRARRGPGHR 247
           SP   RF+  L  R GP H+
Sbjct: 163 SPNAYRFRPPLNPRFGPTHQ 182


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 82  LYQLGKNIDPLIYNELMTDLAKKFEE 159
           LY     I+P++YN +       F++
Sbjct: 316 LYYFSTTINPILYNLMSIKYRNAFKQ 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,341
Number of Sequences: 438
Number of extensions: 2275
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)