Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M20
(304 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA seque... 165 3e-41
CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein. 165 3e-41
BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation ... 165 3e-41
BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation ... 165 3e-41
BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation ... 165 3e-41
AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA seq... 165 3e-41
AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation ... 165 3e-41
AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation ... 165 3e-41
AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein. 165 3e-41
AY358370-1|AAQ88736.1| 258|Homo sapiens EGFL5 protein. 35 0.054
AL138836-3|CAC22313.2| 602|Homo sapiens multiple EGF-like-domai... 35 0.054
AK222865-1|BAD96585.1| 1195|Homo sapiens SH3 domain and tetratri... 30 1.2
AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens ... 30 1.2
AK074093-1|BAB84919.1| 822|Homo sapiens FLJ00164 protein protein. 30 1.2
AK000363-1|BAA91112.1| 1064|Homo sapiens protein ( Homo sapiens ... 30 1.2
AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein. 30 1.2
AL353574-1|CAC27441.1| 282|Homo sapiens solute carrier family 1... 28 4.7
Z26317-1|CAA81226.1| 1117|Homo sapiens desmoglein 2 protein. 28 6.2
M24461-1|AAB59541.1| 381|Homo sapiens pulmonary surfactant-asso... 28 6.2
M19097-1|AAA36628.1| 243|Homo sapiens protein ( Human pulmonary... 28 6.2
M16764-1|AAA88099.1| 286|Homo sapiens pulmonary surfactant-asso... 28 6.2
J02761-1|AAA60212.1| 381|Homo sapiens pulmonary surfactant-asso... 28 6.2
BC099657-1|AAH99657.1| 1118|Homo sapiens desmoglein 2 protein. 28 6.2
BC099656-1|AAH99656.1| 1118|Homo sapiens desmoglein 2 protein. 28 6.2
BC099655-1|AAH99655.1| 1118|Homo sapiens desmoglein 2 protein. 28 6.2
BC032785-1|AAH32785.1| 381|Homo sapiens surfactant, pulmonary-a... 28 6.2
BC025729-1|AAH25729.1| 145|Homo sapiens CD99L2 protein protein. 28 6.2
AF400074-1|AAK77913.1| 381|Homo sapiens surfactant, pulmonary-a... 28 6.2
U82467-1|AAB53699.1| 561|Homo sapiens tub homolog protein. 27 8.1
U54644-1|AAB53494.1| 506|Homo sapiens tub homolog protein. 27 8.1
BC075032-1|AAH75032.1| 561|Homo sapiens tubby homolog (mouse) p... 27 8.1
BC075031-1|AAH75031.1| 561|Homo sapiens tubby homolog (mouse) p... 27 8.1
AJ277662-1|CAC14586.1| 420|Homo sapiens tubby (mouse) homolog p... 27 8.1
>Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA sequence
from clone RP3-466N1 on chromosome 22q12-13. ).
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein.
Length = 607
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 220 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 279
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 280 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 319
>BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit E interacting protein
protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein.
Length = 564
Score = 165 bits (400), Expect = 3e-41
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 5 EVPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNNENKAWNVLCILNVLHSLVD 184
E+P+QWLW++IDEF+YQFQSF+QYR +T+K S EI+ L + K WNV +LNVLHSLVD
Sbjct: 177 ELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVD 236
Query: 185 KSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
KSNI +QLEVY +GGDP+SVAGE+GRHSLYKMLGYFSLVG
Sbjct: 237 KSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVG 276
>AY358370-1|AAQ88736.1| 258|Homo sapiens EGFL5 protein.
Length = 258
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 303 PTKEKYPSIL*SECLPNSPATES-GSPPAAYTSSCFLMLDLSTRECN 166
PT + PS S LP PATE+ SPP Y +C ++ L+ CN
Sbjct: 163 PTPD-LPSSSNSSVLPTPPATEAPSSPPPEYVCNCSVVGSLNVNRCN 208
>AL138836-3|CAC22313.2| 602|Homo sapiens multiple EGF-like-domains
9 protein.
Length = 602
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 303 PTKEKYPSIL*SECLPNSPATES-GSPPAAYTSSCFLMLDLSTRECN 166
PT + PS S LP PATE+ SPP Y +C ++ L+ CN
Sbjct: 173 PTPD-LPSSSNSSVLPTPPATEAPSSPPPEYVCNCSVVGSLNVNRCN 218
>AK222865-1|BAD96585.1| 1195|Homo sapiens SH3 domain and
tetratricopeptide repeats 1 variant protein.
Length = 1195
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -2
Query: 240 ESGSPPAAYTSSCFLML-DLSTREC 169
+SG+P AA+ S C+L+L D+ +R+C
Sbjct: 556 DSGAPEAAWLSDCYLLLADIYSRKC 580
>AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens
cDNA FLJ23822 fis, clone HUV00387. ).
Length = 1336
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -2
Query: 240 ESGSPPAAYTSSCFLML-DLSTREC 169
+SG+P AA+ S C+L+L D+ +R+C
Sbjct: 697 DSGAPEAAWLSDCYLLLADIYSRKC 721
>AK074093-1|BAB84919.1| 822|Homo sapiens FLJ00164 protein protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -2
Query: 240 ESGSPPAAYTSSCFLML-DLSTREC 169
+SG+P AA+ S C+L+L D+ +R+C
Sbjct: 435 DSGAPEAAWLSDCYLLLADIYSRKC 459
>AK000363-1|BAA91112.1| 1064|Homo sapiens protein ( Homo sapiens
cDNA FLJ20356 fis, clone HEP15821. ).
Length = 1064
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -2
Query: 240 ESGSPPAAYTSSCFLML-DLSTREC 169
+SG+P AA+ S C+L+L D+ +R+C
Sbjct: 526 DSGAPEAAWLSDCYLLLADIYSRKC 550
>AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -2
Query: 240 ESGSPPAAYTSSCFLML-DLSTREC 169
+SG+P AA+ S C+L+L D+ +R+C
Sbjct: 697 DSGAPEAAWLSDCYLLLADIYSRKC 721
>AL353574-1|CAC27441.1| 282|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 282
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = -2
Query: 225 PAAYTSSCFLMLDLSTRECNTLRIQSTFHALFSLFKSSISAGLSLEVRDLYWA 67
P+A SSC L + + + FH LF LFKS I L WA
Sbjct: 182 PSALFSSCQLHAGMHVGIWSKCFLPCEFHLLFVLFKSLIPVTTGESKPSLAWA 234
>Z26317-1|CAA81226.1| 1117|Homo sapiens desmoglein 2 protein.
Length = 1117
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 83 ETCIGQKIEIDKQIHQ 36
E C+GQKI+I+K+I Q
Sbjct: 837 EVCLGQKIDINKEIEQ 852
>M24461-1|AAB59541.1| 381|Homo sapiens pulmonary
surfactant-associated protein SP-B protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 186 QARPGPHTQDLSEQQFPIPLPYCWLCR 212
>M19097-1|AAA36628.1| 243|Homo sapiens protein ( Human pulmonary
surfactant apoprotein 18 (SP 18) mRNA, 3' end. ).
Length = 243
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 48 QARPGPHTQDLSEQQFPIPLPYCWLCR 74
>M16764-1|AAA88099.1| 286|Homo sapiens pulmonary
surfactant-associated proteolipid protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 91 QARPGPHTQDLSEQQFPIPLPYCWLCR 117
>J02761-1|AAA60212.1| 381|Homo sapiens pulmonary
surfactant-associated protein SP-B protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 186 QARPGPHTQDLSEQQFPIPLPYCWLCR 212
>BC099657-1|AAH99657.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 83 ETCIGQKIEIDKQIHQ 36
E C+GQKI+I+K+I Q
Sbjct: 838 EVCLGQKIDINKEIEQ 853
>BC099656-1|AAH99656.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 83 ETCIGQKIEIDKQIHQ 36
E C+GQKI+I+K+I Q
Sbjct: 838 EVCLGQKIDINKEIEQ 853
>BC099655-1|AAH99655.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 83 ETCIGQKIEIDKQIHQ 36
E C+GQKI+I+K+I Q
Sbjct: 838 EVCLGQKIDINKEIEQ 853
>BC032785-1|AAH32785.1| 381|Homo sapiens surfactant,
pulmonary-associated protein B protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 186 QARPGPHTQDLSEQQFPIPLPYCWLCR 212
>BC025729-1|AAH25729.1| 145|Homo sapiens CD99L2 protein protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 174 LLLTNPTSRSN*RCMLLVGILTPWRASLVDIHSTRC 281
L LT PTS + RC L+ G +TP AS+V S C
Sbjct: 89 LSLTFPTSGGS-RCSLVCGCITPISASVVTWCSPFC 123
>AF400074-1|AAK77913.1| 381|Homo sapiens surfactant,
pulmonary-associated protein B protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QTRP-PRSQDPHQQHTPLVAS*CWICQ 180
Q RP P +QD +Q P+ CW+C+
Sbjct: 186 QARPGPHTQDLSEQQFPIPLPYCWLCR 212
>U82467-1|AAB53699.1| 561|Homo sapiens tub homolog protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 80 SRTSKLSPAEIEDLNNENKAWN---VLCILNVLHSLVDKSNIKKQLEVYAAGGDPDSVAG 250
+R + I +L N+ WN +LN H V ++++K ++ G DPD +
Sbjct: 467 ARWQNKNTESIIELQNKTPVWNDDTQSYVLN-FHGRVTQASVKNFQIIH--GNDPDYIVM 523
Query: 251 EFGR 262
+FGR
Sbjct: 524 QFGR 527
>U54644-1|AAB53494.1| 506|Homo sapiens tub homolog protein.
Length = 506
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 80 SRTSKLSPAEIEDLNNENKAWN---VLCILNVLHSLVDKSNIKKQLEVYAAGGDPDSVAG 250
+R + I +L N+ WN +LN H V ++++K ++ G DPD +
Sbjct: 412 ARWQNKNTESIIELQNKTPVWNDDTQSYVLN-FHGRVTQASVKNFQIIH--GNDPDYIVM 468
Query: 251 EFGR 262
+FGR
Sbjct: 469 QFGR 472
>BC075032-1|AAH75032.1| 561|Homo sapiens tubby homolog (mouse)
protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 80 SRTSKLSPAEIEDLNNENKAWN---VLCILNVLHSLVDKSNIKKQLEVYAAGGDPDSVAG 250
+R + I +L N+ WN +LN H V ++++K ++ G DPD +
Sbjct: 467 ARWQNKNTESIIELQNKTPVWNDDTQSYVLN-FHGRVTQASVKNFQIIH--GNDPDYIVM 523
Query: 251 EFGR 262
+FGR
Sbjct: 524 QFGR 527
>BC075031-1|AAH75031.1| 561|Homo sapiens tubby homolog (mouse)
protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 80 SRTSKLSPAEIEDLNNENKAWN---VLCILNVLHSLVDKSNIKKQLEVYAAGGDPDSVAG 250
+R + I +L N+ WN +LN H V ++++K ++ G DPD +
Sbjct: 467 ARWQNKNTESIIELQNKTPVWNDDTQSYVLN-FHGRVTQASVKNFQIIH--GNDPDYIVM 523
Query: 251 EFGR 262
+FGR
Sbjct: 524 QFGR 527
>AJ277662-1|CAC14586.1| 420|Homo sapiens tubby (mouse) homolog
protein.
Length = 420
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 80 SRTSKLSPAEIEDLNNENKAWN---VLCILNVLHSLVDKSNIKKQLEVYAAGGDPDSVAG 250
+R + I +L N+ WN +LN H V ++++K ++ G DPD +
Sbjct: 326 ARWQNKNTESIIELQNKTPVWNDDTQSYVLN-FHGRVTQASVKNFQIIH--GNDPDYIVM 382
Query: 251 EFGR 262
+FGR
Sbjct: 383 QFGR 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,511,370
Number of Sequences: 237096
Number of extensions: 897741
Number of successful extensions: 2770
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -