Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M20
(304 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 111 1e-25
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 111 1e-25
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 29 0.85
Z50756-2|CAA90638.1| 473|Caenorhabditis elegans Hypothetical pr... 27 2.0
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 27 2.6
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 27 3.4
AF067608-5|AAK95865.1| 523|Caenorhabditis elegans Hypothetical ... 26 4.5
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 26 6.0
AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical ... 26 6.0
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 25 7.9
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 25 7.9
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 25 7.9
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 25 7.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 25 7.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 25 7.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 25 7.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 25 7.9
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 111 bits (266), Expect = 1e-25
Identities = 52/102 (50%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Frame = +2
Query: 8 VPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNN--ENK-AWNVLCILNVLHSL 178
+P+ WLW++IDEFVYQFQ+F Y++ K + E+EDL N EN+ AWN+ +LN+L+SL
Sbjct: 143 LPNVWLWDIIDEFVYQFQAFCLYKANPGKRNADEVEDLINIEENQNAWNIYPVLNILYSL 202
Query: 179 VDKSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
+ KS I +QL+ +PDSVA EFG+ LY LGYF+L+G
Sbjct: 203 LSKSQIVEQLKALKEKRNPDSVADEFGQSDLYFKLGYFALIG 244
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 111 bits (266), Expect = 1e-25
Identities = 52/102 (50%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Frame = +2
Query: 8 VPDQWLWELIDEFVYQFQSFAQYRSRTSKLSPAEIEDLNN--ENK-AWNVLCILNVLHSL 178
+P+ WLW++IDEFVYQFQ+F Y++ K + E+EDL N EN+ AWN+ +LN+L+SL
Sbjct: 141 LPNVWLWDIIDEFVYQFQAFCLYKANPGKRNADEVEDLINIEENQNAWNIYPVLNILYSL 200
Query: 179 VDKSNIKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFSLVG 304
+ KS I +QL+ +PDSVA EFG+ LY LGYF+L+G
Sbjct: 201 LSKSQIVEQLKALKEKRNPDSVADEFGQSDLYFKLGYFALIG 242
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 28.7 bits (61), Expect = 0.85
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 282 SIL*SECLPNSPATESGSPPAAYTSSCFLMLDLSTRECNTLRIQSTFHALFSLFKSSISA 103
SI CLP T P A+ +SC ++ C TL ++ T +A F + A
Sbjct: 351 SIAPQTCLPCQTCTSFTDPMGAH-ASCIATYGTNSDGCTTLAVKCTINAGFECDIAKCMA 409
Query: 102 GLSLEVRD 79
+ E D
Sbjct: 410 NAAYECYD 417
>Z50756-2|CAA90638.1| 473|Caenorhabditis elegans Hypothetical
protein T08D10.3 protein.
Length = 473
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 119 LNNENKAWNVLCILNVLHSLVDKSNIKKQLEV 214
LNN N+ NV C+L L ++ + KQL V
Sbjct: 19 LNNLNRNQNVECVLEELSTMKIPKTVAKQLSV 50
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 27.1 bits (57), Expect = 2.6
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = +2
Query: 8 VPDQWLWELIDEFVYQFQS 64
+PD W+ ++++E+V+Q Q+
Sbjct: 194 LPDYWILDIMEEYVFQIQT 212
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 299 PRKNIPASCRVNVYQTRPPRSQDPHQQHTPLVAS*CWICQQENVIH*EYKVHSMPCS 129
PR SC+ Y T+P + Q P+ AS C C Q V H Y+V + C+
Sbjct: 52 PRVQPSCSCQRTTYTTQPQQYSCSCQNTAPVQAS-C-SCAQP-VQHQSYQVQTSQCA 105
>AF067608-5|AAK95865.1| 523|Caenorhabditis elegans Hypothetical
protein B0511.8 protein.
Length = 523
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 293 KNIPASCRVNVYQTRPPRSQDPHQQHTP 210
+N+PA RPP + PHQ H P
Sbjct: 40 ENVPAKSANASTVYRPPYYRKPHQHHEP 67
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 302 QPRKNIPASCRVNVYQTRPPRSQDPHQQHT 213
QP + + + +VYQT+ P QD + Q T
Sbjct: 225 QPNPLVRSQSKSDVYQTQNPYRQDSYSQPT 254
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 302 QPRKNIPASCRVNVYQTRPPRSQDPHQQHT 213
QP + + + +VYQT+ P QD + Q T
Sbjct: 225 QPNPLVRSQSKSDVYQTQNPYRQDSYSQPT 254
>AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical
protein Y40C5A.4b protein.
Length = 441
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 194 IKKQLEVYAAGGDPDSVAGEFGRHSLYKMLGYFS 295
I+K + V+ +++ G+F + SL+ +L YF+
Sbjct: 213 IRKIVTVFLPFAGKENIIGKFFKSSLFSVLAYFN 246
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 11 PDQWLWELIDEFVYQFQSFAQY 76
PD W++IDE + +FA+Y
Sbjct: 264 PDDTDWKMIDEMTTLYTNFAKY 285
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 11 PDQWLWELIDEFVYQFQSFAQY 76
PD W++IDE + +FA+Y
Sbjct: 480 PDDTDWKMIDEMTTLYTNFAKY 501
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 29 ELIDEFVYQFQSFAQYRSRTSKL-----SPAEIEDLNNENK 136
EL+DE + Q + Q R R K+ S A+IEDL +NK
Sbjct: 261 ELVDERIRQMEVELQ-RCRDEKMECQHNSDAQIEDLKTQNK 300
>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 237 SGSP---PAAYTSSCFLMLDLSTRECNTLRIQSTFHALFSLFKSSISAGLSLEVR 82
SG+P AA T + LML ST NTL + S + +SI +G S+E +
Sbjct: 1431 SGTPVTATAAGTPNTSLMLPPSTNYANTLTLSS--QKSMAATSASIRSGKSIETK 1483
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 255 NSPATES--GSPPAAYTSSCFLMLDLSTRECNTLRIQSTFHAL 133
+SPAT S G PP A +S + ++T C+T + H L
Sbjct: 653 SSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 695
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 255 NSPATES--GSPPAAYTSSCFLMLDLSTRECNTLRIQSTFHAL 133
+SPAT S G PP A +S + ++T C+T + H L
Sbjct: 654 SSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 255 NSPATES--GSPPAAYTSSCFLMLDLSTRECNTLRIQSTFHAL 133
+SPAT S G PP A +S + ++T C+T + H L
Sbjct: 654 SSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 255 NSPATES--GSPPAAYTSSCFLMLDLSTRECNTLRIQSTFHAL 133
+SPAT S G PP A +S + ++T C+T + H L
Sbjct: 654 SSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,316,290
Number of Sequences: 27780
Number of extensions: 141773
Number of successful extensions: 459
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -