Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M16
(381 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 242 8e-67
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 242 8e-67
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 225 1e-61
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 128 3e-32
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 34 6e-04
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 25 0.30
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 23 1.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 2.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 2.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 3.7
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 3.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 3.7
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 6.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 8.5
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 242 bits (593), Expect = 8e-67
Identities = 111/121 (91%), Positives = 114/121 (94%)
Frame = +2
Query: 17 PAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK 196
PAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDK
Sbjct: 128 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 187
Query: 197 ALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVP 376
ALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVP
Sbjct: 188 ALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVP 247
Query: 377 G 379
G
Sbjct: 248 G 248
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 242 bits (593), Expect = 8e-67
Identities = 111/121 (91%), Positives = 114/121 (94%)
Frame = +2
Query: 17 PAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK 196
PAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDK
Sbjct: 185 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 244
Query: 197 ALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVP 376
ALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVP
Sbjct: 245 ALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVP 304
Query: 377 G 379
G
Sbjct: 305 G 305
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 225 bits (551), Expect = 1e-61
Identities = 103/120 (85%), Positives = 111/120 (92%)
Frame = +2
Query: 20 AAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 199
A+VAFVPISGWHGDNMLEPS K PW+KGW VERK+G A+GK LIEALDAILPP+RPTDKA
Sbjct: 186 ASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKA 245
Query: 200 LRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPG 379
LRLPLQDVYKIGGIGTVPVGRVETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PG
Sbjct: 246 LRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 128 bits (308), Expect = 3e-32
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = +2
Query: 17 PAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK 196
PAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDK
Sbjct: 112 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
Query: 197 A 199
A
Sbjct: 172 A 172
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 33.9 bits (74), Expect = 6e-04
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 332 KSVEMHHEALQEAVPG 379
KSVEMHHEAL EA+PG
Sbjct: 1 KSVEMHHEALTEALPG 16
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 25.0 bits (52), Expect = 0.30
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 PSLSYPFLAGTEITC-WSRPPKCHGSRDGWLSVKKE 128
P+L F G + C SRP +C G DG++ KE
Sbjct: 160 PALEEQFATGRVLACISSRPGQC-GREDGYILEGKE 194
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 23.0 bits (47), Expect = 1.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 224 YKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEAL 361
++IG VP+ R+ET I F NI E + V++ E L
Sbjct: 22 FQIGLRAVVPICRIETSI-DQQKEDDFRDGNIDVEDEKVQLFSECL 66
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 2.1
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -1
Query: 345 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 229
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 108 WLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVF 209
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 129 RLKVNALLRPSTPSFR 176
RL +N +LRP P F+
Sbjct: 274 RLLMNDILRPYVPEFK 289
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 129 RLKVNALLRPSTPSFR 176
RL +N +LRP P F+
Sbjct: 189 RLLMNDILRPYVPEFK 204
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 129 RLKVNALLRPSTPSFR 176
RL +N +LRP P F+
Sbjct: 508 RLLMNDILRPYVPEFK 523
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 73 LQHVISVPARNGYESDGSRPRP 8
+Q + A + E DG +PRP
Sbjct: 113 IQRALEWNAAHPEEDDGGQPRP 134
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 8.5
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 218 LAGEDGEPCQWG 183
+ G G PC WG
Sbjct: 541 VCGVKGIPCSWG 552
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,394
Number of Sequences: 438
Number of extensions: 2408
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9300375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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