Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M11
(297 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF106591-2|AAC78238.1| 263|Caenorhabditis elegans Hypothetical ... 26 4.2
AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical ... 26 4.2
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 26 5.6
AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 26 5.6
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical ... 25 9.7
AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical
protein F32B4.1 protein.
Length = 415
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 64 YWYVFELVINIWAFY*YQKELGFHTTKKNYNSPINIPQRVIVRNKKSRWSWSCRYK*KLE 243
Y+ +F ++I ++ F +QK F +PI Q + V +KK + +C K
Sbjct: 9 YFLIFYVLITVFLFVQFQKHTKFSEDDLIGVNPIFQQQVIPVADKKLEFLKNCGC--KST 66
Query: 244 ILEKLFFYC 270
+ KL+ +C
Sbjct: 67 VTGKLYDFC 75
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 142 KKNYNSPINIPQRVIVRNKKSRWSWS-CRYK 231
+ Y P + RV+V N SR SW C+ K
Sbjct: 118 ESRYGRPYSTRHRVVVENLSSRISWQVCKTK 148
>AF106591-2|AAC78238.1| 263|Caenorhabditis elegans Hypothetical
protein T01A4.2 protein.
Length = 263
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 158 VQLIFRSE*LCVIKKVGGHGAADTSENSKYWKN 256
V+ + R + C+I G+ A + S YWKN
Sbjct: 111 VEQLLRKQIDCIIGYAYGYALAPVARMSPYWKN 143
>AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical
protein Y46H3A.7 protein.
Length = 295
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 194 IKKVGGHGAADTS-ENSKYWKNCSFI 268
I+K+G A D + N YW++CS +
Sbjct: 120 IRKIGFDSAEDVNLVNDAYWRSCSLV 145
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 189 HNYSLRNINWTIIIFFC 139
H+ SL + NWT +FFC
Sbjct: 34 HHQSLPDENWTPFLFFC 50
>AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein28 protein.
Length = 298
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 174 RNINWTIIIFFCCMKSQFF-LVLIESPNIY-H*FKHIPVKLWITSDFDYNF 28
RN W I FC +FF L+ +P + F PV IT D+NF
Sbjct: 124 RNFIWIFSIIFCITLYEFFKCFLLYAPKSWSFQFVQNPVCNQITWYLDFNF 174
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 168 INWTIIIFFCCMK-SQFFLVLIESPNIYH*FKHI 70
+N + FFCC+ FFL L + ++H +HI
Sbjct: 81 MNQCALAFFCCILILAFFLELAAAVTLFHKQEHI 114
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 142 KKNYNSPINIPQRVIVRNKKSRWSW 216
+ Y P + RV+V N SR SW
Sbjct: 118 ESRYGRPYSTRHRVVVENLSSRISW 142
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 142 KKNYNSPINIPQRVIVRNKKSRWSW 216
+ Y P + RV+V N SR SW
Sbjct: 118 ESRYGRPYSTRHRVVVENLSSRISW 142
>AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical
protein F48G7.13 protein.
Length = 272
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 124 ILFGTNRKPKYLSLIQTHTSKTMDYIGF*LQFLNFSLVPNS 2
+ F + K+L+ +T ++ F QF+ F L+PNS
Sbjct: 198 LCFNSRNSSKFLNFSKTKIINF--FLHFLFQFVKFELIPNS 236
>AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical
protein F23H11.1 protein.
Length = 214
Score = 25.0 bits (52), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 175 QRVIVRNKKSRWSWSC 222
+R +V ++K +W WSC
Sbjct: 139 KRELVASRKKQWCWSC 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,404,380
Number of Sequences: 27780
Number of extensions: 112414
Number of successful extensions: 246
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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