Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M09
(229 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 79 1e-16
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 74 2e-15
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 57 3e-10
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 54 3e-09
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 43 5e-06
SPAPB18E9.03c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 0.33
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 25 1.3
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 25 1.3
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 25 1.3
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 24 2.4
SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 24 3.1
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 4.1
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 23 5.4
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 23 5.4
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 23 5.4
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 23 7.2
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 22 9.5
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 22 9.5
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 22 9.5
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 22 9.5
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 22 9.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 22 9.5
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 78.6 bits (185), Expect = 1e-16
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +3
Query: 57 TLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
TL++G+KIP +G+GTW+S+P + AVK A+ GYRHID A +YGNE EVG+ IK
Sbjct: 17 TLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK 71
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 74.1 bits (174), Expect = 2e-15
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +3
Query: 57 TLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
TL NG KIP IG+GTW+S E AV A+ GYRHID A +YGNEKE+GE I+
Sbjct: 16 TLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR 70
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 57.2 bits (132), Expect = 3e-10
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +3
Query: 39 TSVPVTTLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAI 218
T TL+NG IP IG G + K E V A+D GYRHID A VYGNE G+AI
Sbjct: 6 TESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAI 65
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 53.6 bits (123), Expect = 3e-09
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
Frame = +3
Query: 69 GAKIPV--IGIGT--WKSKPGEVTQ----AVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
G KIPV G+GT +K + GE+ + +VK+A+ G+ HIDCA VYGNE+EVG A+K
Sbjct: 7 GPKIPVPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK 65
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 43.2 bits (97), Expect = 5e-06
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAI 218
L+NG K P G++ + +V A+ GYRHID A +Y NE + G AI
Sbjct: 8 LNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAI 60
>SPAPB18E9.03c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 44
Score = 27.1 bits (57), Expect = 0.33
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 123 LLLVSTSKCLFQLREFLHRCSKL 55
LL +S S+C+F F H C+K+
Sbjct: 19 LLQISISRCVFSKNGFYHVCNKM 41
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 105 KSKPGEVTQAVKDAIDIG 158
+S PGEV Q V D DIG
Sbjct: 12 ESPPGEVNQVVHDIRDIG 29
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 25.0 bits (52), Expect = 1.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 203 FLLVSIDKCAVYVSISDVYGILNSLRNFSWFR 108
F ++S+ C Y +++ YG+ N + S+FR
Sbjct: 60 FSILSLVSCLAYFTMACNYGLKNVFSSASFFR 91
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 25.0 bits (52), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 152 VYGILNSLRNFSWFRLPSAYSNYGNFCTVA--QSCNWHRCHY 33
V GILN S L + +SN+G+ VA QS N HY
Sbjct: 271 VIGILNLPLKVSPVELYNEFSNHGHILGVAINQSINEDMTHY 312
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 65 QRCKNSRNWNRHLEVETRR 121
QRCK+ N++ HLE E ++
Sbjct: 743 QRCKDIINFHAHLEKEEKK 761
>SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 475
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 184 TNAQSMCLYPMSMASLTACVTSPGFDFQVPIPIT 83
+N + +YP +L + PGF Q+ +P+T
Sbjct: 359 SNVLVLRVYPKEFIALKGHIKQPGFSRQI-VPVT 391
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 167 VSISDVYGILNSLRNFSWFRLPSAYSNYGNF 75
VSI + + N+ + S FR ++Y YG+F
Sbjct: 272 VSILRSFALCNATTSSSLFRQIASYGVYGSF 302
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 59 FEQRCKNSRNWNRHLEV 109
FE + S NW +HLE+
Sbjct: 337 FEFNQRKSLNWRQHLEI 353
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/23 (34%), Positives = 9/23 (39%)
Frame = -3
Query: 116 WFRLPSAYSNYGNFCTVAQSCNW 48
W P YS+ G F V W
Sbjct: 206 WLEFPLLYSSIGKFVRVTIDIKW 228
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 23.0 bits (47), Expect = 5.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 227 LSLYSLTHFLLVSIDKCAV-YVSISDVYGILNSLRNFSWFRLPSAYSNYGNFCTVAQSCN 51
L+ YS T F L ++K Y+ + + G + SL + + + N F +AQ
Sbjct: 250 LTRYSPT-FALKLLEKSVFQYLLLDPIRGAMTSLYAATSPEISKEHLNGAYFTAIAQRGI 308
Query: 50 WHRCH 36
HR H
Sbjct: 309 LHRAH 313
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 221 LYSLTHFLLVSIDKCAVYVSIS 156
LYSL++FLL + C + +S
Sbjct: 330 LYSLSNFLLYLENSCVITYDVS 351
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1
Query: 79 IFAPLLKVVTGTDVIIK 29
+F+P+L++ TG+ IIK
Sbjct: 585 VFSPILEISTGSISIIK 601
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 139 LTACVTSPGFD 107
L CVT PGFD
Sbjct: 733 LRECVTQPGFD 743
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 33 IMTSVPVTTLSNGAKIPVIGIGTWKSK 113
+ T+ P+TTL++ A+ + WK K
Sbjct: 95 VPTNTPITTLADDAEELALAKEYWKVK 121
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 22.2 bits (45), Expect = 9.5
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 50 SYNFEQRCKNSRNWNRH 100
S + E+ C++ +W+RH
Sbjct: 393 SLDIERPCRDPEDWHRH 409
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 111 KPGEVTQAVKDAIDIGYRHID 173
K E+T + +DA+ + YR +D
Sbjct: 654 KTKEITLSYEDALGVLYRRVD 674
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 5 EAQSSLIKFNNDIGASYNFEQRCKNSRNWNRHLEVETRRSYAG 133
EA+SSL + + + N N+ ++ +T +SY+G
Sbjct: 586 EAESSLRSVRERLEIRISLSVQSINDLTENKKIKTKTLKSYSG 628
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 935,922
Number of Sequences: 5004
Number of extensions: 16753
Number of successful extensions: 56
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 2,362,478
effective HSP length: 55
effective length of database: 2,087,258
effective search space used: 41745160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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