Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M09
(229 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 85 5e-18
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 85 5e-18
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 73 4e-14
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 65 7e-12
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 60 3e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 58 1e-09
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 56 4e-09
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 55 8e-09
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 52 7e-08
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 50 2e-07
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 46 3e-06
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 28 0.78
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 26 3.1
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 26 3.1
U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of ... 26 3.1
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 26 3.1
AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain ... 26 3.1
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 26 3.1
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 26 3.1
AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever sho... 26 4.1
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 26 4.1
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 25 5.5
AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D prot... 25 5.5
AC024826-4|AAF60804.2| 309|Caenorhabditis elegans Hypothetical ... 25 5.5
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 25 9.6
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 25 9.6
U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical pr... 25 9.6
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 25 9.6
AF016657-11|AAB93655.1| 282|Caenorhabditis elegans Hypothetical... 25 9.6
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 85.4 bits (202), Expect = 5e-18
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
L++G IP IG+GTW+SKPGEV A+K A+ GYRHIDCA VY N+KEVGEA+K
Sbjct: 7 LNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALK 60
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 85.4 bits (202), Expect = 5e-18
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
L++G IP IG+GTW+SKPGEV A+K A+ GYRHIDCA VY N+KEVGEA+K
Sbjct: 7 LNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALK 60
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 72.5 bits (170), Expect = 4e-14
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
LSNG ++PVIG+GTW+S P EV AVK A+ GYR ID A VY NE+ +G AIK
Sbjct: 10 LSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIK 63
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 64.9 bits (151), Expect = 7e-12
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +3
Query: 39 TSVPVTTLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAI 218
+ VP+ TLSNG +P IG+GTW+ E +++A+ GYRHID A +Y NE ++G+A+
Sbjct: 3 SKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDAL 62
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 59.7 bits (138), Expect = 3e-10
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +3
Query: 36 MTSVPVTTLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEA 215
M TL++G ++PVIG GTW+ + V+DA++ GYRHID A + N++EV
Sbjct: 1 MPIADTVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAG 60
Query: 216 IK 221
IK
Sbjct: 61 IK 62
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 57.6 bits (133), Expect = 1e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +3
Query: 57 TLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
TLSN +P +G+GTW+S +V AVK A+ GY ID A Y NE+ +G AIK
Sbjct: 49 TLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIK 103
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 55.6 bits (128), Expect = 4e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKT 224
L NG +IP + +GT+++K ++ AV +A+ +GYR D A Y NEK++G A+KT
Sbjct: 4 LKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKT 58
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +3
Query: 30 LIMTSVPVTTLSNGAKIPVIGIGTWKSKP-GEVTQAVKDAIDIGYRHIDCAFVYGNEKEV 206
+ + S+P+ T GA++P+ G+GTW+ K E+T A++ A+D GYR ID A +Y NE +
Sbjct: 1 MTVDSIPLNT---GAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHII 57
Query: 207 GEAI 218
G+ +
Sbjct: 58 GKVL 61
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 51.6 bits (118), Expect = 7e-08
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
L++G IP +G GT+K V A+ A+ GYR D A Y NEKE+GEA+K
Sbjct: 15 LNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALK 68
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 50.0 bits (114), Expect = 2e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 60 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIK 221
L+ G P+IG+GT+K +V + A+ GYR D A VY NEKE+G+A++
Sbjct: 5 LNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALE 58
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 47.6 bits (108), Expect = 1e-06
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 45 VPVTTLSNGAKIPVIGIGTWKSKPGEVTQAVKDAI-DIGYRHIDCAFVYGNEKEVGEAIK 221
+P T LSN ++P+IG+GT S G AV +I GYR ID A YG EK++G A+K
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHS-GGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK 60
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 46.4 bits (105), Expect = 3e-06
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 78 IPVIGIGTWKSKPGEVTQAVKDA-IDIGYRHIDCAFVYGNEKEVGEAIK 221
+P+IGIGTW+ + E+ + V DA GYR ID A VY NE ++G ++
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILE 59
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 28.3 bits (60), Expect = 0.78
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 143 ILNSLRNFSWFRLPSAYSNYGNFCTVAQSCNWH 45
IL NFSW L + Y + T + +C +H
Sbjct: 289 ILEKKNNFSWIMLENQYRSNAKIATWSNTCFYH 321
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 194 VSIDKCAVYVSI-SDVYGILNSLRNFSWFRLPSAYSNYGNFCTVAQSCNWHRCH 36
+ +++C + + S + N+L ++ P+ YS G C SC ++CH
Sbjct: 250 IDVNECEGEIRVCSPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDSCVKNKCH 303
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 194 VSIDKCAVYVSI-SDVYGILNSLRNFSWFRLPSAYSNYGNFCTVAQSCNWHRCH 36
+ +++C + + S + N+L ++ P+ YS G C SC ++CH
Sbjct: 250 IDVNECEGEIRVCSPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDSCVKNKCH 303
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical
protein ZK512.3 protein.
Length = 1418
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 51 VTTLSNGAKIPVIGIGTWKSKPGEV 125
++++ NG K +IG GTW GEV
Sbjct: 85 MSSVENGLKSFLIGCGTWLISSGEV 109
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 87 IGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNE 197
+G W S G V V I Y ++C+F E
Sbjct: 129 LGYSAWFSVAGAVFYLVVAGFSISYARVECSFTKSQE 165
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical
protein C06B8.7 protein.
Length = 3118
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 83 GNFCTVAQSCNWHRCHY*I*LNLTVPR 3
GNFC + NWH Y I +N P+
Sbjct: 681 GNFCAYSNESNWH-SKYRIPINSVYPK 706
>U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of
potassium channelsprotein 28 protein.
Length = 523
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 160 YPMSMASLTACVTSPGFDFQVPIPITGIFAPLLKVVTGTDVII 32
+P SM +T+ G+ VPI +TG A ++ + G +++
Sbjct: 168 FPNSMFFAATVITTIGYGNLVPITVTGRVACIIFALLGIPLLL 210
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 211 SPTSFSFP*TNAQSMCLYPMSMASLTACVTSPGFDFQVPIPITGIFAPLLKVVTGT 44
SPT P T ++M PMS A + FD +P ++ + ++ +T T
Sbjct: 416 SPTPTRTPRTQKRAMFRTPMSTAKMEPVAKKLNFDTDLPPCMSPATSEMISFITPT 471
>AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain K
channel protein.
Length = 523
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 160 YPMSMASLTACVTSPGFDFQVPIPITGIFAPLLKVVTGTDVII 32
+P SM +T+ G+ VPI +TG A ++ + G +++
Sbjct: 168 FPNSMFFAATVITTIGYGNLVPITVTGRVACIIFALLGIPLLL 210
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 87 IGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNE 197
+G W S G V V I Y ++C+F E
Sbjct: 129 LGYSAWFSVAGAVFYLVVAGFSISYARVECSFTKSQE 165
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 211 SPTSFSFP*TNAQSMCLYPMSMASLTACVTSPGFDFQVPIPITGIFAPLLKVVTGT 44
SPT P T ++M PMS A + FD +P ++ + ++ +T T
Sbjct: 416 SPTPTRTPRTQKRAMFRTPMSTAKMEPVAKKLNFDTDLPPCMSPATSEMISFITPT 471
>AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform b protein.
Length = 461
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Frame = +2
Query: 35 NDIGASYNFEQRCKNSRN-----WNRHLEVE 112
N +G +++FE+ C+N +N W++ +E E
Sbjct: 239 NSLGEAFSFEEMCQNLQNFASMDWSKEVENE 269
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Frame = +2
Query: 35 NDIGASYNFEQRCKNSRN-----WNRHLEVE 112
N +G +++FE+ C+N +N W++ +E E
Sbjct: 239 NSLGEAFSFEEMCQNLQNFASMDWSKEVENE 269
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 5 EAQSSLIKFNNDIGASYNFEQRCKNSRNWNRHLEVET 115
E +L K NN++ +YN E K +N ++ EV+T
Sbjct: 101 EENEALRKENNNLKDTYNNENIAKIGKNLDKLQEVKT 137
>AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D
protein.
Length = 405
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 134 SLRNFSWFRLPSAYSNYGNFCTVAQSC 54
S NF R+P ++ G+F TV Q C
Sbjct: 207 SFFNFLASRIPQIHNTRGDFQTVVQKC 233
>AC024826-4|AAF60804.2| 309|Caenorhabditis elegans Hypothetical
protein Y55F3AM.5 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 6 RHSQV*SNLIMTSVPVTTLSNGAKIPVIGI 95
+ S + + L +T VP+T SNG +IP + I
Sbjct: 125 KRSLLDTQLSITLVPLTQKSNGIQIPALKI 154
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 197 LVSIDKCAVY-VSISDVYGILNSLRNFSWFRLPSAYSNYGN 78
++ + C Y +S +G + L N W+ Y+N GN
Sbjct: 366 IIHCNSCVYYKLSALQAFGQIAYLENGKWYLNKWVYNNQGN 406
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 197 LVSIDKCAVY-VSISDVYGILNSLRNFSWFRLPSAYSNYGN 78
++ + C Y +S +G + L N W+ Y+N GN
Sbjct: 366 IIHCNSCVYYKLSALQAFGQIAYLENGKWYLNKWVYNNQGN 406
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 175 QSMCLYPMSMASLTACVTSP 116
Q +C+YP S+T C+ P
Sbjct: 64 QLVCVYPEEYKSMTGCMRKP 83
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 9 HSQV*SNLIMTSVPVTTLSNGAKIPVIGIGTWKSKPG 119
HSQ + L + T+ +P++G G W K G
Sbjct: 71 HSQYSNGLDINPGTRVTVDGNLNVPIMGWGMWDYKGG 107
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 179 CAVYVSISDVYGILNSLRNFSWF 111
C V + ++ +LNS R F WF
Sbjct: 482 CHFVVKLQNINCLLNSERKFEWF 504
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 179 CAVYVSISDVYGILNSLRNFSWF 111
C V + ++ +LNS R F WF
Sbjct: 482 CHFVVKLQNINCLLNSERKFEWF 504
>U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical
protein C32B5.9 protein.
Length = 470
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 23 IKFNNDIGASYNFEQRCKN 79
IKF DIG Y+ E + KN
Sbjct: 393 IKFGRDIGTYYSVELQAKN 411
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 197 LVSIDKCAVY-VSISDVYGILNSLRNFSWFRLPSAYSNYGN 78
++ + C Y +S +G + L N W+ Y+N GN
Sbjct: 366 IIHCNSCVYYKLSALQAFGQIAYLENGKWYLNKWVYNNQGN 406
>AF016657-11|AAB93655.1| 282|Caenorhabditis elegans Hypothetical
protein C16C4.10 protein.
Length = 282
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 26 KFNNDIGASYNFEQRCKNSRNWNRHLEVETR 118
+FN G E+ N RNW +E + R
Sbjct: 179 RFNEFFGLYLRCEKELSNRRNWTIEVEYDLR 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,189,912
Number of Sequences: 27780
Number of extensions: 94546
Number of successful extensions: 373
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 55
effective length of database: 11,212,298
effective search space used: 224245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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