Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_M01
(308 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 116 8e-26
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 71 7e-12
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 55 3e-07
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 53 1e-06
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 51 6e-06
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 39 0.025
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 38 0.044
UniRef50_Q892Y0 Cluster: NAD-dependent DNA ligase; n=1; Clostrid... 34 0.54
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 34 0.71
UniRef50_Q9LVG8 Cluster: Putative F-box protein At5g60060; n=1; ... 33 1.2
UniRef50_Q0LKJ5 Cluster: Beta-glucosidase; n=2; Herpetosiphon au... 32 2.2
UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Sl... 32 2.2
UniRef50_Q8D618 Cluster: Transcriptional regulator; n=18; Gammap... 32 2.9
UniRef50_Q5KNJ1 Cluster: ATP-binding cassette (ABC) transporter,... 32 2.9
UniRef50_Q487K5 Cluster: Putative membrane protein; n=1; Colwell... 31 3.8
UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2; ... 31 3.8
UniRef50_UPI0000D9B719 Cluster: PREDICTED: similar to 60S riboso... 31 5.0
UniRef50_Q7R2I3 Cluster: GLP_623_14514_19574; n=1; Giardia lambl... 31 5.0
UniRef50_Q4P7G8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 31 5.0
UniRef50_Q3F091 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_UPI0000F1ED4A Cluster: PREDICTED: hypothetical protein;... 30 8.8
UniRef50_UPI000049A08E Cluster: hypothetical protein 49.t00007; ... 30 8.8
UniRef50_UPI0000498E5D Cluster: conserved hypothetical protein; ... 30 8.8
UniRef50_Q2VZI3 Cluster: Di-and tricarboxylate transporters; n=2... 30 8.8
UniRef50_Q9VEL5 Cluster: CG31418-PA; n=3; melanogaster subgroup|... 30 8.8
UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 30 8.8
UniRef50_A5K712 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_A2FTP6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 116 bits (280), Expect = 8e-26
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIYKFVGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTVLL 288
RNYDLGNGV+RFSKS+M+HKKA YKF+G+KNP EKPKK TVVVKQIGGEKNGGTRTV L
Sbjct: 30 RNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPL 89
Query: 289 KSRTSF 306
K R SF
Sbjct: 90 KRRKSF 95
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 70.5 bits (165), Expect = 7e-12
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 112 NYDLGNGVLRFSKSRMYHKKAIYKFVGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTVLL- 288
N L G+LR+SK++MY ++A+Y+ +K+P+ EK K P VK+IGG KNGG RTV L
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 289 KSRTSF 306
KS+ S+
Sbjct: 83 KSKASY 88
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 55.2 bits (127), Expect = 3e-07
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIYKFVGQKNPIAEKPK-KPTVVVKQIGGEKNGGTRTV- 282
+N+ L GV FS+S+M+HK+ ++K V P EK K K V VK++ GEKNGG R +
Sbjct: 26 KNHKLPGGVWLFSRSKMFHKRGLFK-VKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
Query: 283 LLKSRTSF 306
L K R S+
Sbjct: 85 LKKERRSY 92
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIYK--FVGQKNPIAEKPKKPTV--VVKQIGGEKNGGTR 276
RN L G+ R+S+S MY +KA+YK + K+ + +K K+ + V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 277 TVLLK 291
V L+
Sbjct: 106 VVKLR 110
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 50.8 bits (116), Expect = 6e-06
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIY--KFVGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTV 282
RN +L G+ R+S+S +Y K+A+Y K G K + ++P+ T K IGG+KNGG R V
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT---KDIGGDKNGGKRVV 67
Query: 283 LLKSRTSF 306
++ + +
Sbjct: 68 PVQRESRY 75
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 38.7 bits (86), Expect = 0.025
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 121 LGNGVLRFSKSRMYHK--KAIYKFVGQKNPIAEKP--KKPTVVVKQIGGEKNGGTRTVLL 288
L +G FSK+ K +A + + + +A+K KKP V+ K+IGG+KNGGTR V
Sbjct: 3 LASGKYVFSKAEAARKYLEAKRRQLPKSVKLAKKAQKKKPLVIEKKIGGDKNGGTRLVST 62
Query: 289 KSRTSF 306
+ F
Sbjct: 63 RKPPQF 68
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 37.9 bits (84), Expect = 0.044
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIYKFVGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTVLL 288
RN L G R+S +Y +K Y V K +K K V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 289 K 291
+
Sbjct: 107 Q 107
>UniRef50_Q892Y0 Cluster: NAD-dependent DNA ligase; n=1; Clostridium
tetani|Rep: NAD-dependent DNA ligase - Clostridium
tetani
Length = 244
Score = 34.3 bits (75), Expect = 0.54
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 255 TAYLLNHDGWFLGLFSNR-VLLTDKLIYSLLVVHPAFGETEYTVSEVIIPRFAN 97
T LL GWFL F N + L YSLLV+H E++ + + P AN
Sbjct: 77 TKRLLKKVGWFLKYFKNHPTFFNEYLNYSLLVIHYLRALIEFSTAINVTPTSAN 130
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 33.9 bits (74), Expect = 0.71
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIYKFVGQKNPIAEKPK 222
RN+DL GVLRFS SR+ KK K K+ A+ PK
Sbjct: 12 RNFDLSPGVLRFSASRLRLKKGEKKPKFTKDTSAKLPK 49
>UniRef50_Q9LVG8 Cluster: Putative F-box protein At5g60060; n=1;
Arabidopsis thaliana|Rep: Putative F-box protein
At5g60060 - Arabidopsis thaliana (Mouse-ear cress)
Length = 374
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 119 TSETVYSVSPKAGCTTRRLYISLSVRRTRLLKSPRNQPSWLSK*AVKRMEALVQS 283
+S+T++ + ++ C T RL + LS + RL K P+ P W S + L QS
Sbjct: 30 SSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKFPKYLPFWSSSSSSSGFFTLKQS 84
>UniRef50_Q0LKJ5 Cluster: Beta-glucosidase; n=2; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-glucosidase -
Herpetosiphon aurantiacus ATCC 23779
Length = 474
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 225 FLGL---FSNRVLLTDKLIYSLLVVHPAFGETEYTVSEVIIPRFANFL 91
FLG+ F NR+ D+ + LV PA GET + EV+ FA+ L
Sbjct: 294 FLGINYYFPNRISAADESKFLALVNSPAIGETSFRGWEVVPAAFADLL 341
>UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1723
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 104 NRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRLLKSPRNQPS 235
N G TSE + ++ + G T +++ + +R R SPR QP+
Sbjct: 1569 NNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPT 1612
>UniRef50_Q8D618 Cluster: Transcriptional regulator; n=18;
Gammaproteobacteria|Rep: Transcriptional regulator -
Vibrio vulnificus
Length = 264
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 219 GLFSNRV---LLTDKLIYSLLVVHPAFGETEYTVSEVIIPRFAN 97
G F+++V LL D L+ SLL +P + ++ +EV+IP AN
Sbjct: 221 GAFASKVGALLLVDVLVNSLLESYPEYKDSVQETAEVVIPLMAN 264
>UniRef50_Q5KNJ1 Cluster: ATP-binding cassette (ABC) transporter,
putative; n=2; Filobasidiella neoformans|Rep:
ATP-binding cassette (ABC) transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 867
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 171 LLVVHPAFGETEYTVSEVIIPRFANFLLLDTAGCGCGGFLRHLGLWWSHNIPS 13
LL++H +F TV V++ R ++ D GFLR LG W+ +PS
Sbjct: 159 LLLLH-SFFLVSRTVLSVMVARLDGKIVRDLVSANAVGFLRGLGWWFILAVPS 210
>UniRef50_Q487K5 Cluster: Putative membrane protein; n=1; Colwellia
psychrerythraea 34H|Rep: Putative membrane protein -
Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 292
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 260 FSPPICLTTTVGFLGFSAIGFF*---PTNLYIAFLWYILLL 147
F IC+TT +G +A+ F+ P L+ +F W+ LLL
Sbjct: 117 FKRIICVTTIASIIGLNAVFFYQVNSPATLHTSFSWFSLLL 157
>UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2;
Zymomonas mobilis|Rep: Putative uncharacterized protein
- Zymomonas mobilis
Length = 390
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 294 AFQQDCTSASILFTAYLLNHDGWFLGLFSNRVL 196
A QD TSA I + YLL H WF G ++L
Sbjct: 350 ALLQDKTSADIAYYDYLLGHSRWFSGQEGQQLL 382
>UniRef50_UPI0000D9B719 Cluster: PREDICTED: similar to 60S ribosomal
protein L6 (TAX-responsive enhancer element-binding
protein 107) (TAXREB107) (Neoplasm-related protein
C140); n=1; Macaca mulatta|Rep: PREDICTED: similar to
60S ribosomal protein L6 (TAX-responsive enhancer
element-binding protein 107) (TAXREB107)
(Neoplasm-related protein C140) - Macaca mulatta
Length = 109
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 166 KKAIYK--FVGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTVLL 288
KK YK + K+ I EK K V K +GG+KNGG V L
Sbjct: 26 KKGTYKRKYSAAKSKI-EKEKVLATVTKPVGGDKNGGAPVVKL 67
>UniRef50_Q7R2I3 Cluster: GLP_623_14514_19574; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_14514_19574 - Giardia lamblia
ATCC 50803
Length = 1686
Score = 31.1 bits (67), Expect = 5.0
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 279 CTSAS-ILFTAYLLNHDGWFLGLFSNRVLLTDKLIYSLLVVHPAFGETEYTVSEVIIPRF 103
CT+ S +LF AY+L + N VLL + YS L + E V + + P F
Sbjct: 905 CTTYSDLLFGAYMLEFIRFSRFNSLNEVLLCQFINYSQLYWSDSLASAEPLVVKSLEPCF 964
Query: 102 ANFLLLD 82
F+LLD
Sbjct: 965 PTFILLD 971
>UniRef50_Q4P7G8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 815
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 132 TVSEVIIPRFANFLLLDTAGCGCGGFLRHLGLWWSHNIPS 13
T +++ R ++ D GFLR LGLW+ +IPS
Sbjct: 202 TYLSMLVARLDGIIVRDLVSANGRGFLRGLGLWFLLSIPS 241
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 109 RNYDLGNGVLRFSKSRMYHKKAIY 180
RN DL GV ++S+S+MYHK+ ++
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLW 35
>UniRef50_Q3F091 Cluster: Putative uncharacterized protein; n=1;
Bacillus thuringiensis serovar israelensis ATCC
35646|Rep: Putative uncharacterized protein - Bacillus
thuringiensis serovar israelensis ATCC 35646
Length = 1782
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 115 YDLGNGVLRFSKSRMYHKKAIYKFVGQKN 201
++LGN +FSK Y + A+YKF G K+
Sbjct: 416 FNLGNIYDKFSKDTKYKQPALYKFPGSKD 444
>UniRef50_UPI0000F1ED4A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 184
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 98 LANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRLLKSPRNQPS 235
L + G+ T + SVSP+ TT +L ++L+V RN+PS
Sbjct: 88 LKDEGVYTCHLIVSVSPRVSKTT-KLKVNLTVSEKASTHDYRNEPS 132
>UniRef50_UPI000049A08E Cluster: hypothetical protein 49.t00007; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
49.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 2061
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 291 FQQDCTSASILFTAYLLNHDGWFLGLFSNRVLLTDKLIYSLLVVHPAFGETEYTVS 124
F+ TS S+LF ++ + W+L LF L K+ LL V +TEY S
Sbjct: 903 FEDSKTSESLLFDSFYILRQSWYLSLFLTP--LGIKVCIKLLQVSTLNHKTEYCKS 956
>UniRef50_UPI0000498E5D Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 861
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 163 HKKAIYKFVGQKNPIAEKPKKPTVVVKQIGGE 258
+++ IYKF G K KP +P VVK++ E
Sbjct: 612 NQEGIYKFAGAKKEGESKPVRPVKVVKEVHRE 643
>UniRef50_Q2VZI3 Cluster: Di-and tricarboxylate transporters; n=2;
Magnetospirillum|Rep: Di-and tricarboxylate transporters
- Magnetospirillum magneticum (strain AMB-1 / ATCC
700264)
Length = 460
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 187 VGQKNPIAEKPKKPTVVVKQIGGEKNGGTRTVLL 288
+G NPI P VV Q+GGE+ G +T+ L
Sbjct: 403 LGFSNPILPYESAPMVVAMQLGGERLGPAQTLCL 436
>UniRef50_Q9VEL5 Cluster: CG31418-PA; n=3; melanogaster
subgroup|Rep: CG31418-PA - Drosophila melanogaster
(Fruit fly)
Length = 225
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 139 RFSKSRMYHKKAIYKFVGQKNPIAEKP-KKPTVVVKQIGGEK 261
R + R+ H K IYK + +KP +KP VV I G K
Sbjct: 132 RLNGERIVHDKGIYKLYHHVEDVEQKPIRKPRVVGPPITGNK 173
>UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=2; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 878
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 124 GNGVLRFSKSRMYHKKAIYKFVGQKN-PIAEKPKKPTVVVKQIGGEKN 264
G G R S + K+A K V + + +KPKK + VVK+ G KN
Sbjct: 827 GKGSFRSSAQAIGAKQAESKLVERAQLQVTQKPKKGSKVVKKAGARKN 874
>UniRef50_A5K712 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 380
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 148 KSRMYHKKAIYKFVGQKNPIAEKPKK 225
K+ +Y + ++Y +V +KNPI PKK
Sbjct: 197 KNNIYAEDSLYNYVSKKNPILMPPKK 222
>UniRef50_A2FTP6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 345
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 270 ASILFTAYLLNHDGWFLGLFSNRVLLTDKLIY-SLLVVHPAFGETEYTVSEVIIPRFANF 94
AS LF + HD + G R++ L+Y S+L++H T+ T+ ++IPR +
Sbjct: 15 ASALFIRTDIAHDAFGHGSIGIRIVFIIALVYSSILLMH----HTKTTIHSIVIPRLGDG 70
Query: 93 LLL 85
+L
Sbjct: 71 TIL 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.135 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,867,916
Number of Sequences: 1657284
Number of extensions: 5521489
Number of successful extensions: 14545
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14540
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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