SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L24
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.                  190   3e-48
BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.       190   3e-48
BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.       190   3e-48
BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.       190   3e-48
AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13 p...   190   3e-48
BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13 p...   186   3e-47
BC009431-1|AAH09431.1|  559|Homo sapiens family with sequence si...    29   8.6  
AY358207-1|AAQ88574.1|  559|Homo sapiens WTNF5791 protein.             29   8.6  
AK054664-1|BAB70787.1|  559|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  190 bits (462), Expect = 3e-48
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  186 bits (454), Expect = 3e-47
 Identities = 90/147 (61%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 45  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RP+VRC TVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65

Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
           YHTKVRAGRGF+L E+R +G++   ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 405 LFP-KGKKVLKGEANEEERKLATQLRG 482
           LFP K     KG+++ EE KLATQL G
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTG 152


>BC009431-1|AAH09431.1|  559|Homo sapiens family with sequence
           similarity 55, member C protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 6   RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
           R++   S ++ +G+   P+G+++KD W  ++F    FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344


>AY358207-1|AAQ88574.1|  559|Homo sapiens WTNF5791 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 6   RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
           R++   S ++ +G+   P+G+++KD W  ++F    FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344


>AK054664-1|BAB70787.1|  559|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
           BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
          Length = 559

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 6   RLRSGKSFKMGKGNNMIPNGHFHKD-W--QRFVKTWFNQP 116
           R++   S ++ +G+   P+G+++KD W  ++F    FN P
Sbjct: 305 RIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDP 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,814,072
Number of Sequences: 237096
Number of extensions: 1232193
Number of successful extensions: 5749
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5734
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -