Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L23
         (475 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   247   7e-66
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   247   7e-66
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   233   9e-62
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.60 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.60 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.60 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  247 bits (604), Expect = 7e-66
 Identities = 119/154 (77%), Positives = 136/154 (88%)
 Frame = +1

Query: 13  MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCPF 192
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREA++GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 193 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 372
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 373 GDIVTIGECRPLSETVRFNVLKVSRGKGSKKSFK 474
           GDIVTIGECRPLS+TVRFNVLKVS+G+G+KKSFK
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 153


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  247 bits (604), Expect = 7e-66
 Identities = 119/154 (77%), Positives = 136/154 (88%)
 Frame = +1

Query: 13  MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCPF 192
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREA++GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 193 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 372
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 373 GDIVTIGECRPLSETVRFNVLKVSRGKGSKKSFK 474
           GDIVTIGECRPLS+TVRFNVLKVS+G+G+KKSFK
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 153


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  233 bits (570), Expect = 9e-62
 Identities = 112/155 (72%), Positives = 135/155 (87%), Gaps = 1/155 (0%)
 Frame = +1

Query: 13  MADQ-TERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKKCP 189
           MADQ TERSF+KQ  V + R+K   +K+  +P R+++ +GLGF+ P EA++GTYIDKKCP
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCP 57

Query: 190 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 369
           +TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 58  WTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVE 117

Query: 370 IGDIVTIGECRPLSETVRFNVLKVSRGKGSKKSFK 474
            GDIVTIGECRPLS+TVRFNVLKVS+G+G+KKSFK
Sbjct: 118 HGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 152


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 205 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 345
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 205 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 345
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 205 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 345
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,200,812
Number of Sequences: 53049
Number of extensions: 509279
Number of successful extensions: 1115
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)