Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L23
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.55 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   5.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   5.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   6.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.9  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 64  SRRQLVAFGMNVLSDPPYCP 5
           +R++L+  G +VL  PPY P
Sbjct: 255 TRQKLLELGWDVLPHPPYSP 274


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 100 KPLRYHKDVGLGFKTP 147
           +P+  HK   + F+TP
Sbjct: 274 QPVHVHKQTAIAFRTP 289


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 100 KPLRYHKDVGLGFKTP 147
           +P+  HK   + F+TP
Sbjct: 274 QPVHVHKQTAIAFRTP 289


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -2

Query: 102 LTAALHADAFLAIQEDSWLLLE 37
           +   LH D ++  Q+ +W+ L+
Sbjct: 544 VACGLHRDTYIHAQQIAWMALK 565


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 344 YRLASGTWRSETSSQLASAGRFPRQSGSMY*RSLEAKV 457
           YRL        TSS++   G+ P  S +     LEA+V
Sbjct: 494 YRLNKPLMSLITSSEVRQPGKAPNYSVNWTIGQLEAEV 531


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 216 PYPDRRCSENENAA 257
           PYPD   ++NEN +
Sbjct: 104 PYPDWTWAKNENCS 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,268
Number of Sequences: 438
Number of extensions: 3073
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)