Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L18
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 36 0.007
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 35 0.016
U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical pr... 35 0.022
Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical pr... 34 0.038
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 31 0.35
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 30 0.47
AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin... 30 0.62
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 29 0.82
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 29 1.1
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 28 1.9
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 28 2.5
Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical p... 28 2.5
AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical ... 28 2.5
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 28 2.5
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 28 2.5
Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 27 3.3
AL110484-4|CAB54396.2| 425|Caenorhabditis elegans Hypothetical ... 27 3.3
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 27 3.3
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 27 4.4
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 27 4.4
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 9 PRAASCRIRHEDFYSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQ 188
PRA SC E Y+G ++ +D D R +C+ DLVS+ +Q EN + L+
Sbjct: 322 PRADSC----EHTYNGFCYSVNTNLLDEPDARQVCQRVSGDLVSIHSQAENLFLQSLVNS 377
Query: 189 NDV 197
V
Sbjct: 378 TGV 380
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 35.1 bits (77), Expect = 0.016
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 48 YSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYI 206
Y+G+ + + D ++ C++ C +LVS+ + EENN + L N YI
Sbjct: 172 YNGNCYYPSQSALSEQDAQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224
>U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical
protein T19E7.1 protein.
Length = 178
Score = 34.7 bits (76), Expect = 0.022
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 48 YSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDV 197
Y H + V W+ N+CR LVS++ + EN + KL ++N++
Sbjct: 57 YEDHWYKMFETDVMWIPAENVCRSMGGHLVSIKDESENLFVHKLRKKNNI 106
>Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical
protein F49A5.9 protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.038
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 NICREYC-MDLVSMETQEENNLIFKLIQQNDVPYIWTSGRLC 227
++C Y L S+ ++ENN IF + + V Y WT G +C
Sbjct: 130 SVCMSYGGSTLFSIRNEQENNAIFDFVSNSSVDYFWT-GLIC 170
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 30.7 bits (66), Expect = 0.35
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 114 REYCMDLVSMETQEENNLIFKLIQQNDVPYIWTSGRLCD 230
RE L S+ ++ENN + + V YIWT G +C+
Sbjct: 178 REGGSTLFSIRNEQENNATLDFVSNSGVAYIWT-GLICN 215
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.3 bits (65), Expect = 0.47
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 96 DGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYI 206
D + C++ C +LVS+ + EENN + L N YI
Sbjct: 181 DAQFSCQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217
>AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin
protein 21 protein.
Length = 421
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 48 YSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVP--YIWTSGR 221
Y+G+ + + + + C E C +LVS+ + E NL ++ N +P YI+ G
Sbjct: 165 YNGYCYIPHSEAKSFENAQKSCEEECGNLVSIHSANE-NLYLNILAYNFLPGEYIYIGGM 223
Query: 222 LCDF 233
+ DF
Sbjct: 224 VQDF 227
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 29.5 bits (63), Expect = 0.82
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +3
Query: 9 PRAASCRI--RHEDF----YSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLI 170
PRA C + H D Y+GH L + ++ + IC + C +L S+ + EN +
Sbjct: 144 PRAFVCELPATHADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLASIHSSNENRYL 203
Query: 171 FKLI 182
++
Sbjct: 204 SSIM 207
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 3 TRPRAASCRI--RHED----FYSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENN 164
T PR+ C HED Y+ + ++ + + + IC E C +LVS+ + EN
Sbjct: 135 TEPRSYVCETPSTHEDPCYYNYNNYCYTFSHNQSSFTTAQAICEEECGNLVSIHSANENR 194
Query: 165 LIFKL 179
+ +
Sbjct: 195 YLMNI 199
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 102 RNICREYCMDLVSMETQEENNLIFKLIQ 185
+N C ++C DL ++ T EN I + Q
Sbjct: 182 QNTCEQFCGDLATIHTANENRYILTVAQ 209
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 250 VEISNQRISLVGSGPPIAKRFQLQTRFPTA 339
++I++ R+ L GSG +A+ ++ FPT+
Sbjct: 64 IDITHPRLRLYGSGKELAENVRIHRNFPTS 93
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/53 (20%), Positives = 24/53 (45%)
Frame = +3
Query: 51 SGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIW 209
SG + +++W D + C E L ++++ +N LI ++ +W
Sbjct: 236 SGTKYKIFEERMNWNDAQLHCEELGSHLAYLDSESKNTYATSLIDSQNISMVW 288
>Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 132 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKG 239
L S+ + +EN + ++ +V +WT G +CD G
Sbjct: 145 LFSIRSDQENQAVLDFVKNENVDNLWT-GLICDDHG 179
>AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 132 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKG 239
L S+ + +EN + ++ +V +WT G +CD G
Sbjct: 145 LFSIRSDQENQAVLDFVKNENVDNLWT-GLICDDHG 179
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 96 DGRNICREYCMDLVSMETQEENNLIFKLI 182
D R C DLVS+ +Q EN+ I LI
Sbjct: 280 DAREFCLSLSEDLVSIHSQAENDFIQSLI 308
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 246 SRRDLEPKNILGWFWSANREKISATNQIPNGWG 344
S L +ILG +A EK+ +QIPN WG
Sbjct: 141 SEEKLTFSDILGKPTAAGAEKMIELSQIPNAWG 173
>Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical
protein F49A5.2 protein.
Length = 379
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 132 LVSMETQEENNLIFKLIQQNDVPYIWT 212
LVS++ ++ENN I + + V +WT
Sbjct: 146 LVSIKNEQENNAILNFVPNSAVENLWT 172
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 319 VAEIFSRLADQNQPRIFFGSRSLRDSQPLKSHRRPEVH 206
+ I S+ A QP +F G LRD L H ++H
Sbjct: 45 IGSIPSQSAATRQPYLFTGGLGLRDESLLSLHSEDDLH 82
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 319 VAEIFSRLADQNQPRIFFGSRSLRDSQPLKSHRRPEVH 206
+ I S+ A QP +F G LRD L H ++H
Sbjct: 77 IGSIPSQSAATRQPYLFTGGLGLRDESLLSLHSEDDLH 114
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 319 VAEIFSRLADQNQPRIFFGSRSLRDSQPLKSHRRPEVH 206
+ I S+ A QP +F G LRD L H ++H
Sbjct: 77 IGSIPSQSAATRQPYLFTGGLGLRDESLLSLHSEDDLH 114
>AL110484-4|CAB54396.2| 425|Caenorhabditis elegans Hypothetical
protein Y38E10A.5 protein.
Length = 425
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 48 YSGHVPALANRKVDWLDGRNICREYCMDLVSMETQEENNLI 170
Y+G N + G+ IC + C +L S+ + EN I
Sbjct: 166 YNGFCYTFHNTASTYTKGQKICEQECGNLASIHSANENRYI 206
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 132 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLC 227
L S+ ++EN+ I +N++ IWT G LC
Sbjct: 133 LFSIRNEQENSAILDFASKNNIGNIWT-GLLC 163
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 96 DGRNICREYCMDLVSMETQEENNLIFKL 179
D + IC+ C +LVS+ + EN I L
Sbjct: 252 DAQEICKTRCANLVSISSANENRFIRSL 279
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = +3
Query: 51 SGHVPALANRKVDWLDGRNICREYCMDLVSMETQEEN---NLIFKLIQQNDVPYI---WT 212
S ++P +A+ ++ + C E C LVS+ + EN N++ QN+ +I WT
Sbjct: 161 SCYIPHVAS---SFIRAQRTCEEECGSLVSIHSANENRYFNILASTFAQNEQVFIGGMWT 217
Query: 213 -SGR 221
SGR
Sbjct: 218 LSGR 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,581,487
Number of Sequences: 27780
Number of extensions: 197131
Number of successful extensions: 493
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -