Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L18
         (374 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   0.67 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   3.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   8.3  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 42  DFYSGHVPALANRKVDWLDGRN 107
           +FY G  P   N  +DWL G N
Sbjct: 674 EFYIGGNPFNCNCSMDWLPGIN 695


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 111 CREYCMDLVSMETQEENNLIFKLIQQND 194
           C+ YCMDL+  E  +  N  + L    D
Sbjct: 459 CKGYCMDLLK-ELSKTINFTYSLALSPD 485


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 215 WAPMRFQRLRIT*RSRTKEYPWLVLV 292
           WAP   QRL       +K+ P  VL+
Sbjct: 298 WAPFHAQRLLAVYAQNSKDKPEDVLI 323


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 146 LHGDEVHAVF 117
           LHGDEV  VF
Sbjct: 495 LHGDEVEYVF 504


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 282 WFWSANREKISA 317
           WFW+A   + SA
Sbjct: 30  WFWTATSHEASA 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,798
Number of Sequences: 438
Number of extensions: 2448
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)