Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L17
         (277 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            21   6.4  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         21   8.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   8.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 235 FFFCALCEFYVC 200
           F  C  C+FY C
Sbjct: 741 FALCHCCDFYAC 752


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -2

Query: 111 AVHLNHGFSMARIDLVATVRRKRPIFIL 28
           A + +H   +AR+ L  + R+++P+ ++
Sbjct: 91  AANHHHLAHLARVGLYGSSRKQKPVLMM 118


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 79   QDRSCSHCKAQKTDLH 32
            + R C  CK  K D H
Sbjct: 1012 EGRRCDRCKENKYDRH 1027


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,711
Number of Sequences: 2352
Number of extensions: 6010
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16167927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)