Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L17
         (277 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   0.13 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   2.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   3.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   8.6  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 0.13
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = +2

Query: 131 TPNCEAAHLMRRNPR----KSNMDPFYTDVKFTKGAEEEPGQETYKKGHKSS 274
           TP      L R +PR    ++  +P  TD +     +EE   E Y   HK +
Sbjct: 144 TPRINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHKET 195


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = +3

Query: 111 QDIHILELQIVKLPI**GEIPVKVTWTR 194
           +D+H+ E   +   +  G++P+ ++W +
Sbjct: 620 RDLHLGERTTLTCSVTRGDLPLSISWLK 647


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 182 YFYGDFSSSNGQLHNLEFK 126
           +FY D  +S  +LH L+F+
Sbjct: 352 FFYPDPLASKYELHGLKFQ 370


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 170  DFSSSNGQLHNLEFKNV 120
            DFS  +G+ H+L+  N+
Sbjct: 1031 DFSKEDGKEHHLQIMNL 1047


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 186  MLLLRGFLLIKWAASQF 136
            ++L R FLL +W+  +F
Sbjct: 1129 IVLTRNFLLTEWSRFEF 1145


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 240 PGSSSAPFVNF 208
           PGS+SA F N+
Sbjct: 557 PGSNSAVFTNY 567


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 7  GTRVSWSQNEDRSFAPYSGYKIYP 78
          G R+   +NE     PY  Y  YP
Sbjct: 12 GDRIPDEKNEMYPKDPYLYYDFYP 35


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
          precursor protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 7  GTRVSWSQNEDRSFAPYSGYKIYP 78
          G R+   +NE     PY  Y  YP
Sbjct: 27 GDRIPDEKNEMYPKDPYLYYDFYP 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,929
Number of Sequences: 438
Number of extensions: 1767
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)