Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L14
(276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.029
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 31 0.088
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 30 0.27
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 29 0.62
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 1.9
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 1.9
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 1.9
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 1.9
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 1.9
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 27 2.5
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 27 2.5
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 27 2.5
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 26 3.3
Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 25 5.8
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 25 5.8
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 25 5.8
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 25 5.8
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 25 5.8
AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor o... 25 5.8
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 25 7.7
U41553-2|AAA83292.1| 476|Caenorhabditis elegans Hypothetical pr... 25 7.7
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 25 7.7
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 25 7.7
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 25 7.7
U23174-3|AAX22284.1| 381|Caenorhabditis elegans Serpentine rece... 25 7.7
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 25 7.7
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 25 7.7
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 33.1 bits (72), Expect = 0.029
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 179 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQCF 271
RD N+P P R P K RL +P+ WF F
Sbjct: 88 RDLTNYPYPSRPMYPPKTRLLMMPDSWFTAF 118
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.088
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 179 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQCF 271
RD N+P P R P K RL +P+ WF F
Sbjct: 90 RDLVNYPYPARPMYPPKSRLLMMPDSWFTPF 120
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 29.9 bits (64), Expect = 0.27
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 164 LWWSFWQ*VLCTGTVWPQ 111
L+W WQ VLC G W Q
Sbjct: 144 LYWGVWQFVLCVGAEWQQ 161
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 258 HSSGMNPSLTLPGSVSLTGLG 196
HSS NP L +P S++LTG G
Sbjct: 155 HSSNNNPKLHMPESLTLTGSG 175
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Frame = +1
Query: 31 PTVDIFYEIYSGEFTHKNAITRSFTFSCGQT-----VPVHSTYCQ--KLHHRCCWCA**E 189
PT Y + E N T S+T SC ++ P+++T C + WCA E
Sbjct: 139 PTGTFAYFVAGTEMQGSNGGTDSYTVSCEESACSACTPIYNTGCMGYGVPSPTNWCAIGE 198
Query: 190 ELPKT 204
++P T
Sbjct: 199 DIPVT 203
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 109
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 62 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 220
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 54 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 106
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 62 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 220
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 354 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 406
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 246 MNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLA 145
++PS +LPG V + K SS T V+ELLA
Sbjct: 158 IHPSASLPGRVGKSSFLKKKSSSTQEDVVLELLA 191
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 26.2 bits (55), Expect = 3.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 118 QTVPVHSTYCQKLHHRCCWC 177
Q P TYC++++H C C
Sbjct: 434 QCTPKPCTYCKRINHHCSIC 453
>Z72518-1|CAA96699.2| 395|Caenorhabditis elegans Hypothetical
protein ZC374.1 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 164 LWWSFWQ*VLCTGTVWPQLNVKLRVIAFLC 75
+W S+W VW Q ++ RV +FLC
Sbjct: 75 IWRSYW----IYNIVWTQGDIMCRVFSFLC 100
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 25.4 bits (53), Expect = 5.8
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +3
Query: 126 PRTQHLLPE---APP----QMLLVCVMRRTSQDQSGSLNLV 227
P+T HL+PE APP QM + + SQ Q S N+V
Sbjct: 864 PKTSHLVPESIPAPPFEPVQMPIPAPPAQVSQPQEQSSNMV 904
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 10 NSARGFRPTVDIFYEIYSGEFTHKNAITRSFTFSCG 117
N + FRP I+ E YS E H+N CG
Sbjct: 533 NCSDTFRPVPYIYNEHYSPEGCHRNCFQLKVLEICG 568
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 10 NSARGFRPTVDIFYEIYSGEFTHKNAITRSFTFSCG 117
N + FRP I+ E YS E H+N CG
Sbjct: 533 NCSDTFRPVPYIYNEHYSPEGCHRNCFQLKVLEICG 568
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -1
Query: 240 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 73
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 72 -KFTTVNLVKY 43
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -1
Query: 240 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 73
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 72 -KFTTVNLVKY 43
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
>AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform b protein.
Length = 544
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -1
Query: 240 PSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAAERKATRDSIFMR---- 73
P PG+++L G+F R T+++ L + A E D + +R
Sbjct: 132 PLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAAD 191
Query: 72 -KFTTVNLVKY 43
FT +N KY
Sbjct: 192 SSFTAINTGKY 202
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 19 RGFRPTVDIFYEIYSGEFTHKNAI 90
R F P + I YE Y GE T + I
Sbjct: 121 RNFWPNLTISYEFYGGEETWRQLI 144
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 19 RGFRPTVDIFYEIYSGEFTHKNAI 90
R F P + I YE Y GE T + I
Sbjct: 121 RNFWPNLTISYEFYGGEETWRQLI 144
>U41553-2|AAA83292.1| 476|Caenorhabditis elegans Hypothetical
protein ZK1193.3 protein.
Length = 476
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 270 KHWNHSSGMNPSLTLPGSVSLT 205
K W S+ ++P LTLP + L+
Sbjct: 313 KQWTISANLSPILTLPNNTQLS 334
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 105 VQLRPNSPRTQHLLPEAPPQMLLVCVMRRT 194
VQ +PN Q+ +PE+P ++ V + R+T
Sbjct: 580 VQNQPNMMARQNSVPESPRTVINVPISRKT 609
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 105 VQLRPNSPRTQHLLPEAPPQMLLVCVMRRT 194
VQ +PN Q+ +PE+P ++ V + R+T
Sbjct: 580 VQNQPNMMARQNSVPESPRTVINVPISRKT 609
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 105 VQLRPNSPRTQHLLPEAPPQMLLVCVMRRT 194
VQ +PN Q+ +PE+P ++ V + R+T
Sbjct: 580 VQNQPNMMARQNSVPESPRTVINVPISRKT 609
>U23174-3|AAX22284.1| 381|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 14, isoform a
protein.
Length = 381
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 117 PNSPRTQHLLPEAPPQMLLVCVMRRTSQ 200
P SP T +LP PP + + R + Q
Sbjct: 336 PESPETSEMLPADPPPLHKIITSRPSRQ 363
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 19 RGFRPTVDIFYEIYSGEFTHKNAI 90
R F P + I YE Y GE T + I
Sbjct: 121 RNFWPNLTISYEFYGGEETWRQLI 144
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 67 EFTHKNAITRSFTFSCGQTVPVHSTYCQKLHHRCCWC 177
+ +NAI F T P+H+ YC+++ ++ C
Sbjct: 538 QMVDQNAIPVLLEF-LSLTHPIHADYCRRIRYKAAVC 573
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,811,351
Number of Sequences: 27780
Number of extensions: 128535
Number of successful extensions: 393
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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