Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L14
(276 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 2.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 2.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 2.1
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 2.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 2.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 2.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 3.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 3.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 3.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 6.5
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 6.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 6.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 19 8.6
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.4 bits (43), Expect = 2.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 195 KFFSSRTPATSVVELLAISAV---YGDCLAAAERKATRDSIFMRKFTT 61
+ +S + ++ E+LA + Y DC A T DS+F + T
Sbjct: 21 ELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSHIT 68
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 2.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 167 VAGVRDEKNFPRPVRLTEPGK 229
+ G DE+ P P L PGK
Sbjct: 371 INGRADEEAAPAPQHLIHPGK 391
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 2.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 167 VAGVRDEKNFPRPVRLTEPGK 229
+ G DE+ P P L PGK
Sbjct: 371 INGRADEEAAPAPQHLIHPGK 391
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.4 bits (43), Expect = 2.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 195 KFFSSRTPATSVVELLAISAV---YGDCLAAAERKATRDSIFMRKFTT 61
+ +S + ++ E+LA + Y DC A T DS+F + T
Sbjct: 21 ELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSHIT 68
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 2.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 167 VAGVRDEKNFPRPVRLTEPGK 229
+ G DE+ P P L PGK
Sbjct: 309 INGRADEEAAPAPQHLIHPGK 329
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 2.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 197 GSSSHHAHQQH 165
GSS HH H H
Sbjct: 331 GSSPHHQHGNH 341
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 3.7
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -3
Query: 85 HFYA*IHHCKSRKICRP 35
H Y ++HC + C P
Sbjct: 1687 HMYEELNHCAPNRRCPP 1703
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 3.7
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 34 TVDIFYEIYSGEFTHKNAITRSFTFSCGQTVPVHSTYCQK 153
T I+ G +N F+ SC P+ S CQ+
Sbjct: 508 TAPIYTLKRKGLIKSENEAADFFSGSCAPGAPLDSKLCQQ 547
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 3.7
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 34 TVDIFYEIYSGEFTHKNAITRSFTFSCGQTVPVHSTYCQK 153
T I+ G +N F+ SC P+ S CQ+
Sbjct: 508 TAPIYTLKRKGLIKSENEAADFFSGSCAPGAPLDSKLCQQ 547
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 3.7
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 34 TVDIFYEIYSGEFTHKNAITRSFTFSCGQTVPVHSTYCQK 153
T I+ G +N F+ SC P+ S CQ+
Sbjct: 508 TAPIYTLKRKGLIKSENEAADFFSGSCAPGAPLDSKLCQQ 547
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 19.8 bits (39), Expect = 6.5
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3
Query: 211 PDWSW 197
PDWSW
Sbjct: 112 PDWSW 116
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.8 bits (39), Expect = 6.5
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3
Query: 211 PDWSW 197
PDWSW
Sbjct: 112 PDWSW 116
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 6.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 197 GSSSHHAHQQHLWWSFWQ 144
GS+S L+W +WQ
Sbjct: 558 GSNSAVFTNYKLYWRYWQ 575
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 19.4 bits (38), Expect = 8.6
Identities = 4/4 (100%), Positives = 4/4 (100%)
Frame = +1
Query: 166 CCWC 177
CCWC
Sbjct: 12 CCWC 15
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,457
Number of Sequences: 438
Number of extensions: 1404
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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