Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L13
(309 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical pr... 30 0.29
U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein. 30 0.29
AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical ... 30 0.29
Z81146-2|CAB03526.1| 340|Caenorhabditis elegans Hypothetical pr... 29 0.50
Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical pr... 28 1.2
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 1.5
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 27 3.5
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 27 3.5
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical... 26 4.7
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 26 6.2
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 26 6.2
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 6.2
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 26 6.2
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 26 6.2
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 25 8.1
AC024798-3|AAP86612.1| 361|Caenorhabditis elegans Hypothetical ... 25 8.1
AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical ... 25 8.1
>Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 30.3 bits (65), Expect = 0.29
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +3
Query: 45 PSQVTGYAASGPTSWTSYLFSPASIPVWSGEASWSLLKQLISGDYPDLL-TLVRTYRPRS 221
P+Q GYA P W + PA V E + +L GD+ L TY P
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQALHGKETTYSPVK 382
Query: 222 --INPLDEMPAKLRAVVINGQRIFTFDGKHL 308
++ E A+ ++ FT KHL
Sbjct: 383 YWLHRDPEQEAEFVEFLLENGESFTLTEKHL 413
>U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein.
Length = 550
Score = 30.3 bits (65), Expect = 0.29
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +3
Query: 45 PSQVTGYAASGPTSWTSYLFSPASIPVWSGEASWSLLKQLISGDYPDLL-TLVRTYRPRS 221
P+Q GYA P W + PA V E + +L GD+ L TY P
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQALHGKETTYSPVK 382
Query: 222 --INPLDEMPAKLRAVVINGQRIFTFDGKHL 308
++ E A+ ++ FT KHL
Sbjct: 383 YWLHRDPEQEAEFVEFLLENGESFTLTEKHL 413
>AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 30.3 bits (65), Expect = 0.29
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +3
Query: 45 PSQVTGYAASGPTSWTSYLFSPASIPVWSGEASWSLLKQLISGDYPDLL-TLVRTYRPRS 221
P+Q GYA P W + PA V E + +L GD+ L TY P
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQALHGKETTYSPVK 382
Query: 222 --INPLDEMPAKLRAVVINGQRIFTFDGKHL 308
++ E A+ ++ FT KHL
Sbjct: 383 YWLHRDPEQEAEFVEFLLENGESFTLTEKHL 413
>Z81146-2|CAB03526.1| 340|Caenorhabditis elegans Hypothetical
protein K10D11.2 protein.
Length = 340
Score = 29.5 bits (63), Expect = 0.50
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 180 PDLLTLVRTYRPRSIN---PLDEMPAKLRAVVINGQRIFTFDG 299
P +TLV+TY IN PL+ L+ VV +GQ FTF G
Sbjct: 297 PTDMTLVKTYTGLEINKAVPLNFQGDVLQFVVSSGQADFTFKG 339
>Z82272-2|CAB05216.1| 342|Caenorhabditis elegans Hypothetical
protein F55G11.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 180 PDLLTLVRTYRPRSIN---PLDEMPAKLRAVVINGQRIFTFDG 299
P + T+V+ Y IN PL+ L+ VV +G+ FTFDG
Sbjct: 298 PTVGTIVKNYTALEINKAVPLNFQGEVLQFVVSSGKADFTFDG 340
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 217 DRSTHLTKCLLNFALWSSTDSAFSRSTANT 306
D+ TH+T ++ AL SSTDS S+S T
Sbjct: 850 DKETHVTTTPVSVALPSSTDSTQSKSAIPT 879
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 57 TGYAASGPTSWTSYLFSPASI-PVWSGEASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 233
TG A G S YL + I +GE ++ + QLI+G P+L + +P N L
Sbjct: 244 TGNVAGGYVS--HYLLETSRICRQAAGERNYHIFYQLIAGSSPELFKFLALGQPNQFNYL 301
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 57 TGYAASGPTSWTSYLFSPASI-PVWSGEASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 233
TG A G S YL + I +GE ++ + QLI+G P+L + +P N L
Sbjct: 244 TGNVAGGYVS--HYLLETSRICRQAAGERNYHIFYQLIAGSSPELFKFLALGQPNQFNYL 301
>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
protein Y57A10A.15 protein.
Length = 1072
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 87 WTSYLFSPAS-IPVWSGEASWSLLK--QLISGDYPDLLTLVRTYRPRSINPL 233
WTSY S + +WS EA+W + ++I G + T RS++ L
Sbjct: 606 WTSYSDRYCSEVAIWSPEATWRTAENLEMIDGAIAAAVVPAGTISRRSVHKL 657
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 774 PLSHSKSSGLTKSFSNFALNSS 795
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 543 PLSHSKSSGLTKSFSNFALNSS 564
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 359 PLSHSKSSGLTKSFSNFALNSS 380
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 541 PLSHSKSSGLTKSFSNFALNSS 562
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 599 PLSHSKSSGLTKSFSNFALNSS 620
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 293 ERENALSVDDHSAKFSRH-FVKWVDRSWSVGTNQSKQVGIVSRYQLFE 153
E E+ + + + H +++ D + +G + SKQ+ +VS Y LF+
Sbjct: 96 ENEDGFDFRTVTTQRTEHVYIRTEDDQFILGVSISKQLSLVSDYPLFQ 143
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 774 PLSHSKSSGLTKSFSNFALNSS 795
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 543 PLSHSKSSGLTKSFSNFALNSS 564
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 359 PLSHSKSSGLTKSFSNFALNSS 380
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 541 PLSHSKSSGLTKSFSNFALNSS 562
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 599 PLSHSKSSGLTKSFSNFALNSS 620
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 205 PTDHDRSTHLTKCLLNFALWSS 270
P H +S+ LTK NFAL SS
Sbjct: 399 PLSHSKSSGLTKSFSNFALNSS 420
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +1
Query: 19 RSVHSRNTY---RPRSPVMLLLDLHHGLV 96
R V+ Y RP +PV++L LHHG V
Sbjct: 1590 RKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +1
Query: 19 RSVHSRNTY---RPRSPVMLLLDLHHGLV 96
R V+ Y RP +PV++L LHHG V
Sbjct: 1590 RKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +1
Query: 19 RSVHSRNTY---RPRSPVMLLLDLHHGLV 96
R V+ Y RP +PV++L LHHG V
Sbjct: 1590 RKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 129 SGEASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 233
+GE ++ + QLI+G PDL +R S N L
Sbjct: 46 AGERNYHIFYQLIAGSSPDLYKKLRLAPASSFNYL 80
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 129 SGEASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 233
+GE ++ + QLI+G PDL +R S N L
Sbjct: 248 AGERNYHIFYQLIAGSSPDLYKKLRLAPASSFNYL 282
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 54 VTGYAASGPTSWTSYLFSP 110
VT Y + PT +T Y+FSP
Sbjct: 349 VTVYTSLNPTVFTPYMFSP 367
>AC024798-3|AAP86612.1| 361|Caenorhabditis elegans Hypothetical
protein Y48G9A.9b protein.
Length = 361
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 168 SGDYPDLLTLVRTYRPRSINPLDEMPAKLRAVVIN 272
S D ++ L T+ P ++ P+DE PA L+ + +N
Sbjct: 203 SSDEFEICNLAVTFVPDNV-PVDEQPANLKELRVN 236
>AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical
protein Y48G9A.9a protein.
Length = 352
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 168 SGDYPDLLTLVRTYRPRSINPLDEMPAKLRAVVIN 272
S D ++ L T+ P ++ P+DE PA L+ + +N
Sbjct: 194 SSDEFEICNLAVTFVPDNV-PVDEQPANLKELRVN 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,595,183
Number of Sequences: 27780
Number of extensions: 147011
Number of successful extensions: 413
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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