Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L11
(220 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL954705-4|CAI17270.1| 551|Homo sapiens novel protein protein. 28 6.2
AL954705-3|CAI17269.1| 666|Homo sapiens novel protein protein. 28 6.2
U52153-1|AAB07044.1| 423|Homo sapiens inwardly rectifying potas... 27 8.2
U24660-1|AAC50258.1| 423|Homo sapiens hiGIRK2 protein. 27 8.2
S78685-1|AAB34738.2| 407|Homo sapiens ATP-sensitive inwardly re... 27 8.2
L78480-1|AAB02277.1| 423|Homo sapiens inwardly rectifying K+ ch... 27 8.2
D87327-1|BAA13331.1| 423|Homo sapiens G protein-coupled inward ... 27 8.2
BC101547-1|AAI01548.1| 423|Homo sapiens potassium inwardly-rect... 27 8.2
AY014294-1|AAG42143.1| 243|Homo sapiens HOXB8 protein. 27 8.2
AK096222-1|BAC04730.1| 243|Homo sapiens protein ( Homo sapiens ... 27 8.2
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein. 27 8.2
>AL954705-4|CAI17270.1| 551|Homo sapiens novel protein protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 76 SDEYSP--GPNCGLEPTCAPRSSPIRTPKHTCD 168
SDE+SP G +EP PR P++ KH D
Sbjct: 442 SDEHSPHNGSLFTMEPPHVPRKPPLQDVKHALD 474
>AL954705-3|CAI17269.1| 666|Homo sapiens novel protein protein.
Length = 666
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 76 SDEYSP--GPNCGLEPTCAPRSSPIRTPKHTCD 168
SDE+SP G +EP PR P++ KH D
Sbjct: 557 SDEHSPHNGSLFTMEPPHVPRKPPLQDVKHALD 589
>U52153-1|AAB07044.1| 423|Homo sapiens inwardly rectifying
potassium channel Kir3.2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 204 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 232
>U24660-1|AAC50258.1| 423|Homo sapiens hiGIRK2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 204 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 232
>S78685-1|AAB34738.2| 407|Homo sapiens ATP-sensitive inwardly
rectifying K-channel subunit protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 188 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 216
>L78480-1|AAB02277.1| 423|Homo sapiens inwardly rectifying K+
channel protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 204 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 232
>D87327-1|BAA13331.1| 423|Homo sapiens G protein-coupled inward
rectifier potassium channel protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 204 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 232
>BC101547-1|AAI01548.1| 423|Homo sapiens potassium
inwardly-rectifying channel, subfamily J, member 6
protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 203 IYSVSSLVNHQQSQVCFGVRIGELRGAHV 117
++S ++++ + ++C R+G+LR +H+
Sbjct: 204 VFSTHAVISMRDGKLCLMFRVGDLRNSHI 232
>AY014294-1|AAG42143.1| 243|Homo sapiens HOXB8 protein.
Length = 243
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 120 CGF*STVGTRGILITSAFSRSSFHENNETQQDYNAPAS 7
CGF +G R ++ S SF ++ Q+ Y+ P+S
Sbjct: 26 CGFAQDLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSS 63
>AK096222-1|BAC04730.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ38903 fis, clone NT2NE2001252, highly similar to
HOMEOBOX PROTEIN HOX-B8. ).
Length = 243
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 120 CGF*STVGTRGILITSAFSRSSFHENNETQQDYNAPAS 7
CGF +G R ++ S SF ++ Q+ Y+ P+S
Sbjct: 26 CGFAQDLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSS 63
>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
Length = 2793
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 112 LVHSWDPGNTHHFGIFTVKL 53
LVH W+P +T H G+ V+L
Sbjct: 2 LVHQWNPKDTLHTGLLLVQL 21
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,864,167
Number of Sequences: 237096
Number of extensions: 715091
Number of successful extensions: 1667
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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