Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L10
         (196 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   0.25 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   0.25 
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   1.0  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   1.3  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    21   7.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    21   7.1  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 38  LPELITYFNCFIKCVIFMLVVSTFLL*QMH 127
           +P L TYFNC I  ++   VVST L+   H
Sbjct: 274 VPLLGTYFNC-IMFMVASSVVSTILILNYH 302


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 38  LPELITYFNCFIKCVIFMLVVSTFLL*QMH 127
           +P L TYFNC I  ++   VVST L+   H
Sbjct: 306 VPLLGTYFNC-IMFMVASSVVSTILILNYH 334


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 38  LPELITYFNCFIKCVIFMLVVSTFLL*QMH 127
           +P L TYFNC +  V   +V++  +L   H
Sbjct: 291 IPLLGTYFNCIMFMVASSVVLTVVVLNYHH 320


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 38  LPELITYFNCFIKCVIFMLVVSTFLL*QMH 127
           +P L TYFNC +  V   +V++  +L   H
Sbjct: 291 VPLLGTYFNCIMFMVASSVVLTVVVLNYHH 320


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 162 LTITTTKN*RYICICH 115
           LTIT     RY  ICH
Sbjct: 135 LTITAFTIERYFAICH 150


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +1

Query: 76  MRDIYASSVHLSFMTDAYIPLIFC 147
           ++++Y +   L+     Y P+I+C
Sbjct: 332 IQEVYLAIYWLAMSNSMYNPIIYC 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,057
Number of Sequences: 2352
Number of extensions: 2120
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 42
effective length of database: 465,195
effective search space used: 10234290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)