Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L10
         (196 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399539-1|AAK95024.1|  216|Homo sapiens olfactory receptor prot...    27   8.0  
AB065927-1|BAC06142.1|  324|Homo sapiens seven transmembrane hel...    27   8.0  

>AF399539-1|AAK95024.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 100 VHLSFMTDAYIPLIFCCCYGKIN-SATDEVINN 195
           + LSF TD  IPL FC     I  + +D +INN
Sbjct: 97  LRLSFCTDLEIPLFFCELAQVIQLTCSDTLINN 129


>AB065927-1|BAC06142.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 100 VHLSFMTDAYIPLIFCCCYGKIN-SATDEVINN 195
           + LSF TD  IPL FC     I  + +D +INN
Sbjct: 164 LRLSFCTDLEIPLFFCELAQVIQLTCSDTLINN 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,427,800
Number of Sequences: 237096
Number of extensions: 323194
Number of successful extensions: 713
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1328536760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)