Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L10
(196 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.062
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 0.25
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 0.58
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.76
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.76
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 0.76
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 0.76
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 1.8
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 1.8
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 20 3.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 19 4.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 4.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 19 4.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 4.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 19 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 19 5.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 7.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 7.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 7.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 7.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 19 7.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 18 9.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 18 9.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 18 9.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 18 9.4
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.062
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL*QMH 127
+P L TYFNC I ++ VVST L+ H
Sbjct: 291 VPLLGTYFNC-IMFMVASSVVSTILILNYH 319
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 0.25
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 162 LTITTTKN*RYICICHKRKVDTTS 91
LTI RY+ ICH +V T S
Sbjct: 130 LTIVAFSMERYLAICHPLRVYTIS 153
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 0.58
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 162 LTITTTKN*RYICICH 115
LTIT RYI ICH
Sbjct: 143 LTITAFTVERYIAICH 158
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.76
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P L +YFNC + V +V++ +L
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVL 279
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.76
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P L +YFNC + V +V++ +L
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVL 279
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 0.76
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P L +YFNC + V +V++ +L
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVL 279
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 0.76
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P L +YFNC + V +V++ +L
Sbjct: 322 IPLLGSYFNCIMFMVASSVVLTVLVL 347
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P + +YFNC + V +V++ +L
Sbjct: 254 VPLIGSYFNCIMFMVASSVVLTVLVL 279
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P + +YFNC + V +V++ +L
Sbjct: 254 VPLIGSYFNCIMFMVASSVVLTVLVL 279
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P + +YFNC + V +V++ +L
Sbjct: 254 VPLIGSYFNCIMFMVASSVVLTVLVL 279
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 38 LPELITYFNCFIKCVIFMLVVSTFLL 115
+P + +YFNC + V +V++ +L
Sbjct: 322 VPLIGSYFNCIMFMVASSVVLTVLVL 347
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 111 RKVDTTSINITHLIKQLKYVINSGKI 34
R V TTS L +KY N G I
Sbjct: 141 RYVTTTSGMFEALCNHIKYSTNKGNI 166
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +2
Query: 38 LPELITYFNCFIKCVI 85
+ + +T ++CFI C +
Sbjct: 68 IKKYLTNYSCFITCAL 83
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 29 IIILPELITYFN 64
+IILP I++FN
Sbjct: 103 LIILPVAISFFN 114
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 29 IIILPELITYFN 64
+IILP I++FN
Sbjct: 103 LIILPVAISFFN 114
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +3
Query: 99 CPPFF-YDRCIYTSNFLL 149
CP YDR ++ N+LL
Sbjct: 359 CPSMANYDRGVFYKNYLL 376
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 29 IIILPELITYFN 64
+IILP I++FN
Sbjct: 103 LIILPVAISFFN 114
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +3
Query: 99 CPPFF-YDRCIYTSNFLL 149
CP YDR ++ N+LL
Sbjct: 449 CPSMANYDRGVFYKNYLL 466
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 175 WQN*SYHNNNKKL 137
+ N +Y+N NKKL
Sbjct: 333 YNNNNYNNYNKKL 345
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 175 WQN*SYHNNNKKL 137
+ N +Y+NN KKL
Sbjct: 100 YNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 175 WQN*SYHNNNKKL 137
+ N +Y+NN KKL
Sbjct: 100 YNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 175 WQN*SYHNNNKKL 137
+ N +Y+NN KKL
Sbjct: 100 YNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 175 WQN*SYHNNNKKL 137
+ N +Y+NN KKL
Sbjct: 100 YNNNNYNNNCKKL 112
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 18.6 bits (36), Expect = 7.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 163 SYHNNNKKLEVYMHLS 116
+Y+NNN ++Y +++
Sbjct: 316 NYYNNNNYKKLYYNIN 331
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 169 N*SYHNNNKKL 137
N +Y+NN KKL
Sbjct: 106 NNNYNNNYKKL 116
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 169 N*SYHNNNKKL 137
N +Y+NN KKL
Sbjct: 106 NNNYNNNYKKL 116
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 169 N*SYHNNNKKL 137
N +Y+N NKKL
Sbjct: 98 NNNYNNYNKKL 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 169 N*SYHNNNKKL 137
N +Y+NN KKL
Sbjct: 341 NNNYNNNYKKL 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,827
Number of Sequences: 438
Number of extensions: 915
Number of successful extensions: 32
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2541420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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