Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L09
(308 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 171 2e-42
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 169 1e-41
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 146 8e-35
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 138 2e-32
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 128 3e-29
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 122 2e-27
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 115 2e-25
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 114 3e-25
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 111 3e-24
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 109 2e-23
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 103 6e-22
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 91 6e-18
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 84 7e-16
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 81 4e-15
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 75 2e-13
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 75 2e-13
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 74 5e-13
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 73 1e-12
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 71 4e-12
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 71 5e-12
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 66 2e-10
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 64 6e-10
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 62 2e-09
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 62 3e-09
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 61 4e-09
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 60 7e-09
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 60 7e-09
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 59 2e-08
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 58 4e-08
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 57 9e-08
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 52 3e-06
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 51 6e-06
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 50 1e-05
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 41 0.005
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 40 0.008
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 38 0.033
UniRef50_A5DK17 Cluster: Putative uncharacterized protein; n=1; ... 38 0.058
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 36 0.13
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 36 0.18
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 35 0.31
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 35 0.41
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 34 0.54
UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1; ... 34 0.71
UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycopla... 33 0.94
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 33 0.94
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 33 0.94
UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1; Tr... 33 0.94
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 33 0.94
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 33 0.94
UniRef50_Q00XR1 Cluster: Chromosome 12 contig 1, DNA sequence; n... 33 1.2
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 33 1.2
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 33 1.6
UniRef50_UPI00001C4127 Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 32 2.2
UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candida... 31 3.8
UniRef50_A0NPD7 Cluster: Sensory box/GGDEF domain/EAL domain pro... 31 3.8
UniRef50_Q4XST6 Cluster: Arsenical pump-driving ATPase, putative... 31 3.8
UniRef50_A4H9Q1 Cluster: Histone H1; n=4; Leishmania braziliensi... 31 3.8
UniRef50_A7EPQ6 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q8VNR5 Cluster: Ent protein; n=4; Escherichia coli|Rep:... 31 5.0
UniRef50_Q54B93 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_A2G944 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_A7I6P7 Cluster: Molybdenum ABC transporter, periplasmic... 31 6.6
UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein... 30 8.8
UniRef50_A4XUI8 Cluster: TraX family protein; n=1; Pseudomonas m... 30 8.8
UniRef50_A1WD74 Cluster: DNA methylase N-4/N-6 domain protein; n... 30 8.8
UniRef50_Q7QGN0 Cluster: ENSANGP00000018113; n=4; Anopheles gamb... 30 8.8
UniRef50_O45087 Cluster: Dynein chain, light intermediate protei... 30 8.8
UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7; Chlamyd... 30 8.8
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 171 bits (417), Expect = 2e-42
Identities = 72/98 (73%), Positives = 91/98 (92%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFL 192
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+KF+++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 193 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
RKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQ 98
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 169 bits (411), Expect = 1e-41
Identities = 73/97 (75%), Positives = 87/97 (89%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFL 192
M G S K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FFRNK+KF+++L
Sbjct: 1 MPGLSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYL 60
Query: 193 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
RKRCNVNPARGPFHFRAPS++LWK VRGM+PHKT+RG
Sbjct: 61 RKRCNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRG 97
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 146 bits (354), Expect = 8e-35
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ FRNKLKF +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
NP RGPFHFR+P++ILW+T+RGMIPHKT RG
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRG 94
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 138 bits (335), Expect = 2e-32
Identities = 59/96 (61%), Positives = 77/96 (80%)
Frame = +1
Query: 16 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 195
+G S + IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG R K+K++ FLR
Sbjct: 5 SGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLR 64
Query: 196 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
KR N P+ GP HFRAPSKILW+T+RGMIPHKT+RG
Sbjct: 65 KRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRG 100
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 128 bits (308), Expect = 3e-29
Identities = 57/92 (61%), Positives = 71/92 (77%)
Frame = +1
Query: 28 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCN 207
+K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ FRN++KF FL K N
Sbjct: 75 DKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMN 134
Query: 208 VNPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
NP RG HFRAPS+I W+ VRGM+PHKT +G
Sbjct: 135 HNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKG 166
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 122 bits (293), Expect = 2e-27
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+RNKLK+++FL K+ N
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNT 63
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKT 294
NP+RGP+ F+APS+I W T RGM+PHKT
Sbjct: 64 NPSRGPYRFQAPSRIFWWTARGMLPHKT 91
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 115 bits (276), Expect = 2e-25
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G RNK+K++ +LRKR NP
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERG 303
+GPFH RAPS + +TVR M+P T+RG
Sbjct: 85 TKGPFHHRAPSDVFVRTVRSMLPRYTKRG 113
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 114 bits (275), Expect = 3e-25
Identities = 49/92 (53%), Positives = 67/92 (72%)
Frame = +1
Query: 28 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCN 207
+K IVID +GHL GRLA++++K LL+G VVVVR E I +SG R ++ + KR N
Sbjct: 2 DKVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMN 61
Query: 208 VNPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
NP +GP+H+ +PS++ WKTVRGM+PHKT RG
Sbjct: 62 TNPKKGPYHYTSPSRLFWKTVRGMLPHKTVRG 93
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 111 bits (267), Expect = 3e-24
Identities = 46/91 (50%), Positives = 69/91 (75%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G RN K+ S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERG 303
NP RGPFHF++PSKIL++T++ MIPHKT RG
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRG 92
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 109 bits (261), Expect = 2e-23
Identities = 50/89 (56%), Positives = 68/89 (76%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K ++ + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERG 303
RGPFHFRAP++I+ +T+RGMIP+KT RG
Sbjct: 64 LRGPFHFRAPAEIVRRTIRGMIPYKTVRG 92
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 103 bits (248), Expect = 6e-22
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G + FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERG 303
GPFH RAP +I + VRGMIP+KT RG
Sbjct: 65 RDGPFHQRAPHEIFARAVRGMIPYKTHRG 93
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
++ID G + G+LAA +AK+LLEG +V VV E+ G+ R KF +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
RGPFHFR P L K +R MI +K RGK
Sbjct: 67 RRGPFHFREPRMHLAKIIRRMISYKKPRGK 96
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 83.8 bits (198), Expect = 7e-16
Identities = 38/87 (43%), Positives = 57/87 (65%)
Frame = +1
Query: 4 RGKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFM 183
R + +NK VID GH+LGR+A+V+AK LL G K+V+VRCE + + G +++
Sbjct: 1 RHEQMSTNNKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWE 60
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWK 264
+ RKR N NP RG FH R+P++++ K
Sbjct: 61 LYQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 81.4 bits (192), Expect = 4e-15
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 219
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG ++ FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 220 RGPFHFRAPSKILWKTVRGMIPHKTERGK 306
GP+H R P I+ + +RGM+P K GK
Sbjct: 61 HGPYHPRRPDTIMTRMIRGMLPRKKPSGK 89
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 75.4 bits (177), Expect = 2e-13
Identities = 42/97 (43%), Positives = 55/97 (56%)
Frame = +1
Query: 16 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 195
+G +V+D R H+L RLA++IAK LL G +VV
Sbjct: 5 SGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV------------------------- 39
Query: 196 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+
Sbjct: 40 -RMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGE 75
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 75.4 bits (177), Expect = 2e-13
Identities = 38/89 (42%), Positives = 58/89 (65%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 219
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN K+ R NP
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62
Query: 220 RGPFHFRAPSKILWKTVRGMIPHKTERGK 306
RGPF+ + +I+ +T+RGM+P KT+RG+
Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGR 91
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 74.1 bits (174), Expect = 5e-13
Identities = 32/88 (36%), Positives = 54/88 (61%)
Frame = +1
Query: 25 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRC 204
+++ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG ++ FL
Sbjct: 10 TDRPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINS 69
Query: 205 NVNPARGPFHFRAPSKILWKTVRGMIPH 288
+NP GP H+R P I+ K +R M+P+
Sbjct: 70 IINPKHGPVHYRRPDTIITKMIRQMLPY 97
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 72.9 bits (171), Expect = 1e-12
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMS-F 189
M+G +AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G R K++ +
Sbjct: 1 MSG-KEEAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRW 59
Query: 190 LRKRCNVNP-ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+ + NP RGP + + P ++ + VRGM+P + G+
Sbjct: 60 VEWKTYYNPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGR 99
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 71.3 bits (167), Expect = 4e-12
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 219
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + F + K +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKE 74
Query: 220 RGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+GP+ R P +I +TVRGM+P K+ RG+
Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGR 103
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 70.9 bits (166), Expect = 5e-12
Identities = 37/89 (41%), Positives = 58/89 (65%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPA 219
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G +N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 220 RGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+GPF+ R P I + VRGM+P KT+RG+
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGR 102
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
K IVIDGR L+GRLA+ I +L +G + V+RC+ + SG + + + +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 211 NPARGPFHFRAPSKILWKTVRGMI 282
NP +GP+ F PS +L K V+GM+
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGML 86
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 64.1 bits (149), Expect = 6e-10
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +1
Query: 61 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHF 237
+LGRLA+++AK L + +VRCE+I ISG R K+K+M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 62.1 bits (144), Expect = 2e-09
Identities = 33/90 (36%), Positives = 56/90 (62%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
++ D G +LGRLA+++A+ L G +V +V E+ I+G+ N +K +L+K +
Sbjct: 7 LIYDAEGLVLGRLASIVARNLKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDY 63
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+GPF+ + P IL + +RGM+P KT RG+
Sbjct: 64 YKGPFYPKRPDNILKRVIRGMLPRKTARGR 93
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 61.7 bits (143), Expect = 3e-09
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGNFFRNKLKFMSFLRK---- 198
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 199 RCNVNPAR-GPFHFRAPSKILWKTVRGMIPHKTERGK 306
R + NP + GP R P ++ + VRGM+P K+E G+
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGR 112
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 61.3 bits (142), Expect = 4e-09
Identities = 30/90 (33%), Positives = 53/90 (58%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
+V+D R +LGR+++ +A+ +L+G V VV E+ I+G N+ M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITG----NEEATMETYHTRAELGS 65
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
GP++ + P +I + +RGM+P+KTE G+
Sbjct: 66 DSGPYYPKRPDRIFKRAIRGMLPYKTEDGR 95
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 60.5 bits (140), Expect = 7e-09
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
GP+ + P +IL +T+RGM+P+K RG+
Sbjct: 60 EFGPYFPKRPDRILKRTIRGMLPYKRARGR 89
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 60.5 bits (140), Expect = 7e-09
Identities = 29/90 (32%), Positives = 53/90 (58%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + + + KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGN 65
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
G F+ + P I +T+RGM+PHK +RG+
Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGR 95
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 59.3 bits (137), Expect = 2e-08
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K++ ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 217 AR-GPFHFRAPSKILWKTVRGMIPHKTERG 303
+ GP + R P I+ + +RGM+P+K RG
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRG 91
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 58.0 bits (134), Expect = 4e-08
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 16 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 195
T + ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG R + L
Sbjct: 3 TQVQEQVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLT 62
Query: 196 KRCNVNPAR-GPFHFRAPSKILWKTVRGMIPHKTERGK 306
+ NP R G R+P I+ +T+RGM+P K+ +G+
Sbjct: 63 VKTLFNPYRNGIRRPRSPINIVKRTIRGMLP-KSSKGR 99
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 56.8 bits (131), Expect = 9e-08
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKF-MSF 189
+ G + IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ + +
Sbjct: 3 LAGGEAREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTV 62
Query: 190 LRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
L + + + P R P ++ VRGM+P RG+
Sbjct: 63 LGVKSHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGR 101
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 51.6 bits (118), Expect = 3e-06
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
+++D +LGR++ IAK+L G KV VV E+ ISG R + + NP
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67
Query: 217 AR-GPFHFRAPSKILWKTVRGMIPHKTERGK 306
R G R P I+ +TVRGM+P K + GK
Sbjct: 68 YRQGIRRPRNPINIVKRTVRGMLP-KNKLGK 97
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVRCEQINISGNFFRNKLKFMSFLRK 198
+V D +LGRLA+ IAK LL EG+ +V+++ E ++G K + ++ +
Sbjct: 7 LVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP----KDRILADYDR 62
Query: 199 RCNVN-PARGPFHFRAPSKILWKTVRGMIPHK 291
+ +N P +GPF R P IL +TVRGM+P++
Sbjct: 63 KYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQ 94
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/89 (29%), Positives = 46/89 (51%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
I ID H+ GRL++ +AK LL G + +V ++ I+G R + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG---RKEFIIDKFNNLRNTGSI 58
Query: 217 ARGPFHFRAPSKILWKTVRGMIPHKTERG 303
+GP++ + +IL +++ M+P K G
Sbjct: 59 RKGPYYPKTADRILKRSIGDMLPKKKTHG 87
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 41.1 bits (92), Expect = 0.005
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGN------------KVVVVRCEQINISGNFFRNKLKF 180
+VID G LGRL+ V A L GN VVV+ ++I ++GN KL +
Sbjct: 75 VVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQKLYY 134
Query: 181 MSFLRKR--CNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+R + H R P++++ K ++GM+P K G+
Sbjct: 135 TLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLP-KNRMGR 177
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 40.3 bits (90), Expect = 0.008
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKL 174
K ++D LGRL+AV+A VL NK V+V+ E++ ++G NK+
Sbjct: 16 KWYIVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKAANKI 75
Query: 175 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 294
+ + + G + +++ K+V+GM+PH T
Sbjct: 76 YYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNT 115
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 38.3 bits (85), Expect = 0.033
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKLKFM 183
++D LGRLA +A VL NK VVVV ++I +SGN KL
Sbjct: 18 LVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRR 77
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 288
R R P +I+ K ++GM+PH
Sbjct: 78 HSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPH 112
>UniRef50_A5DK17 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 209
Score = 37.5 bits (83), Expect = 0.058
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 306 LPTLSLMWDHSSDGLPEDF*WSSEVKRSTGWVDITSFTKE*HKLQFVPEEIAGNVNLFTT 127
L + L+ +H+S L E+ SSEV+ + G V + ++ LQ V E+ +V +
Sbjct: 116 LTSSGLVRNHTSHSLVENSRRSSEVEWTLGLVVSGTLSQVVVVLQLVSEKFTTDVQGLGS 175
Query: 126 NDHNFVSFQQDLSNYCGQSTEQVPAPVD 43
++ +F++ Q L N Q+T+QV VD
Sbjct: 176 DNDDFLAVQNLLGNDGSQATQQVALTVD 203
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 36.3 bits (80), Expect = 0.13
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 183
VID G LGR+A IAK L+ G+ V+V+ +++ ISG F K F
Sbjct: 73 VIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQKEYFR 132
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
R + R P +I+ K V+GM+P
Sbjct: 133 HSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP 166
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 35.9 bits (79), Expect = 0.18
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 183
V+D LGRLA +A +L G+ VVVV E+I +SG + KL
Sbjct: 18 VVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQKLYRR 77
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 288
R R P +I+ K ++GM+PH
Sbjct: 78 HSGRPGGMKVETFESLQERIPERIVEKAIKGMLPH 112
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 35.1 bits (77), Expect = 0.31
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFRNK 171
++I+ + +LGRLA+ + K LL + + +V+ QI ++GN ++NK
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK 47
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 34.7 bits (76), Expect = 0.41
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFRNKLKFM 183
V+D RG +LGRLA +A +L N V V+ CE + ISG+ K+ +
Sbjct: 8 VLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYYR 67
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
R+P+ +L V GM+P R +
Sbjct: 68 HSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDR 108
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 34.3 bits (75), Expect = 0.54
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Frame = +1
Query: 10 KMTGFSNKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISG 153
K T K ++ID +LGRLAA +A L +G+ V+V+ ++I+++G
Sbjct: 7 KPTEVVKKWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTG 66
Query: 154 NFFRNK-----LKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
+ +K ++ ++KR AR R P +++ K V MIP
Sbjct: 67 KKYTDKKYYWHTGYIGGIKKR----TARQILEGRFPERVVEKAVERMIP 111
>UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1471
Score = 33.9 bits (74), Expect = 0.71
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 64 LGRLAAVIAKVLLEGNKVVVVRCE-QINISGNFFRNKLKFMSFLRKRCNVN 213
L LA +I VL+E N R E +I +S F N+ K++S RKR N N
Sbjct: 991 LDSLALIIGSVLIEAN--TCERSEFEIKVSSKAFENQFKYISEQRKRINDN 1039
>UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein l13 - Mycoplasma
mobile
Length = 144
Score = 33.5 bits (73), Expect = 0.94
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKL 174
K V+D G +LGRLA+V+A L NK ++V+ +++ ++ +K+
Sbjct: 15 KWFVVDAEGQVLGRLASVVASYLRGKNKPTFTPNVDMGDNIIVINADKVVLTAKKEDDKI 74
Query: 175 KFMSF-LRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+ S AR + P ++ K V+GMIPH T+ G+
Sbjct: 75 YYSSSGYNGGLKAINARD-LRAKKPFALVEKAVKGMIPH-TKLGR 117
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 33.5 bits (73), Expect = 0.94
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 61 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHF- 237
L+G+ + + + N V+++ Q+ I+GN +N K + +H
Sbjct: 37 LMGKNRSTYSYNSMSANFVIIINSRQVAITGN--KNTQKVYKRYSAKPGATKTESFYHLK 94
Query: 238 -RAPSKILWKTVRGMIPHKTERGK 306
R P++IL + V+GM+P K+ GK
Sbjct: 95 KRIPNRILEQAVKGMLP-KSVLGK 117
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 33.5 bits (73), Expect = 0.94
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Frame = +1
Query: 37 IVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKL-K 177
IV+D + +LGRLA++ A +++ G VV++ +++ ++G + +KL K
Sbjct: 127 IVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKLYK 186
Query: 178 FMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
R + A R P +I+ ++GM+P KT G+
Sbjct: 187 RHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLP-KTRLGR 228
>UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 8
- Tribolium castaneum (Red flour beetle)
Length = 379
Score = 33.5 bits (73), Expect = 0.94
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 154 NFFRNKLKFMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 282
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 33.5 bits (73), Expect = 0.94
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFRNKL 174
K V+D G LGRLA+ +A +L G+ V++V E+I ++G +K+
Sbjct: 15 KWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKV 74
Query: 175 KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 288
+ R P ++L ++GM+PH
Sbjct: 75 YYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPH 112
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 33.5 bits (73), Expect = 0.94
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISG-----NF 159
K VID G LGRLAA I+++L NK VVVV +++ ++G
Sbjct: 14 KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73
Query: 160 FRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
+R + LR+R R + P +IL + VRGM+P
Sbjct: 74 YRWHTGYPGGLRERSYRQMLR-----KRPEEILRQAVRGMMP 110
>UniRef50_Q00XR1 Cluster: Chromosome 12 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 12 contig 1, DNA
sequence - Ostreococcus tauri
Length = 111
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 119 TTLFPSSRTLAITAASRPSKCPRPSITMALLLKPV 15
TT +P + LA T A RP+ CP S+TM + + V
Sbjct: 68 TTCWPCNSCLATTEARRPNMCPLASMTMTYVARNV 102
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 33.1 bits (72), Expect = 1.2
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Frame = +1
Query: 25 SNKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRN 168
+ K V+D G LGRLA+ +A++L G+ VVV+ E+I I+G N
Sbjct: 11 ARKWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKADN 70
Query: 169 KLKFMSFLRKRCNVNPARGPFHF-RAPSKILWKTVRGMIPHKTERGK 306
K K+ + + R P IL ++GM+P K++ GK
Sbjct: 71 K-KYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLP-KSKLGK 115
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 181 MSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 291
+ + + NP+ GPF F P I TV+ ++P+K
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYK 42
>UniRef50_UPI00001C4127 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 198
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 200 LLRRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAASRPSKCPRPSITMALLLK 21
+L D+NF LFLK L +++ + T+ PS T + ++ P P + T +
Sbjct: 22 ILASRDVNFTLFLKSL-----IAKKASDTISPSPETTPVPTSTSPETTPDSTYTSLETIS 76
Query: 20 P 18
P
Sbjct: 77 P 77
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 32.3 bits (70), Expect = 2.2
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 183
V+D +LGRLAA IA L G+ +VV+ +++ ++GN +K +
Sbjct: 17 VVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINADKLRVTGNKAEDKKYYR 76
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
H R P++ L K V+GM+P
Sbjct: 77 HSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLP 110
>UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candidatus
Phytoplasma asteris|Rep: 50S ribosomal protein L13 -
Onion yellows phytoplasma
Length = 152
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFRNKLKFM 183
++D +G LGRLA +A +L G+ V+VV I+++G ++ K +
Sbjct: 27 LVDAKGKTLGRLATKVASILKGKHKTHYTPHVDNGDYVIVVNAAYIHLTGKKWQQKTYYK 86
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 288
+ P++++ K + GM+PH
Sbjct: 87 HSGYPGGLTKVVASEMMRKFPTRMVEKAILGMVPH 121
>UniRef50_A0NPD7 Cluster: Sensory box/GGDEF domain/EAL domain
protein; n=1; Stappia aggregata IAM 12614|Rep: Sensory
box/GGDEF domain/EAL domain protein - Stappia aggregata
IAM 12614
Length = 489
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 174 QFVPEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVPAPVDYYG 34
Q PE++ L + NF F+ L+N +S E PVDY G
Sbjct: 61 QLTPEQVEAERQLARSEHRNFFIFRHKLANGSIRSVEVHSTPVDYDG 107
>UniRef50_Q4XST6 Cluster: Arsenical pump-driving ATPase, putative;
n=6; Plasmodium|Rep: Arsenical pump-driving ATPase,
putative - Plasmodium chabaudi
Length = 380
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 104 KETKLWSFVVNRLTFPAISSGTN*SLCHSFVKDVMSTQPVDLFTS 238
K ++ VVN++ FP S N C +K + T D F+S
Sbjct: 265 KNISCYNIVVNQVVFPLTSQDANIESCEGLLKQIKDTNIKDSFSS 309
>UniRef50_A4H9Q1 Cluster: Histone H1; n=4; Leishmania
braziliensis|Rep: Histone H1 - Leishmania braziliensis
Length = 163
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 134 SQRTTTTLFPSSRTLAITAASR-PSKCPRPSITMALLLK 21
SQ T + +F +S A+TAAS P + PRPS A + K
Sbjct: 46 SQTTPSKMFANSSAAAVTAASNSPQRSPRPSPKKAAVKK 84
>UniRef50_A7EPQ6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 820
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -1
Query: 131 QRTTTTLFPSSRTLAITAASRPSKCPRPS 45
+RT+ + FPSSR+ ++ + RPS+ P P+
Sbjct: 45 RRTSLSSFPSSRSPSVMSQRRPSRSPNPT 73
>UniRef50_Q8VNR5 Cluster: Ent protein; n=4; Escherichia coli|Rep:
Ent protein - Escherichia coli
Length = 549
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -1
Query: 308 FFPRSVLCGIIPLTVFQRIFDGALK*KGPRA---GLTLHLLRRNDINFNLFLKKLPEMLI 138
FF + +C II LT + + + LK G + L + + ND N N+F+KKLP+ ++
Sbjct: 164 FFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNN-NVFIKKLPDNIL 222
>UniRef50_Q54B93 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 780
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 182 INFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAASRPSKCPRPSIT 39
I +N LP L S TTTT+ PSS T + + S PS P S T
Sbjct: 430 ITYNFPFPLLPN-LNKSTTTTTTIIPSSSTSSTSPTSSPSPSPSLSST 476
>UniRef50_A2G944 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 794
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 112 KVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNP 216
+V +R + + NF RN +FMSFLR N NP
Sbjct: 154 QVPEIRYWALITTNNFARNSQQFMSFLRMNHNFNP 188
>UniRef50_A7I6P7 Cluster: Molybdenum ABC transporter, periplasmic
molybdate-binding protein precursor; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Molybdenum ABC
transporter, periplasmic molybdate-binding protein
precursor - Methanoregula boonei (strain 6A8)
Length = 297
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 137 CSQRTTTTLFPSSRTLAITAASRPSKCPRPSITMA 33
C+Q TTTT P++ T A TAAS P+ P ++ A
Sbjct: 9 CTQSTTTTATPAA-TAAPTAASTPAATPVATVATA 42
>UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein;
n=1; Janthinobacterium sp. Marseille|Rep:
Uncharacterized giant conserved protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 4130
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 43 IDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 162
+ +GH +G AA + L GN+V+ + IN+SG F
Sbjct: 586 LSNQGHSIGEWAAQGGTLTLGGNEVITQQGSAINLSGGSF 625
>UniRef50_A4XUI8 Cluster: TraX family protein; n=1; Pseudomonas
mendocina ymp|Rep: TraX family protein - Pseudomonas
mendocina ymp
Length = 233
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 89 LRSCWKETKLWSFVVNRLTFPAISSGTN*SLCHSFVKDVMS 211
LR W E W FVV R FP G ++ S D+ S
Sbjct: 22 LRYLWPEATAWLFVVGRFAFPLFCLGIAANVSRSHPGDLYS 62
>UniRef50_A1WD74 Cluster: DNA methylase N-4/N-6 domain protein; n=1;
Acidovorax sp. JS42|Rep: DNA methylase N-4/N-6 domain
protein - Acidovorax sp. (strain JS42)
Length = 545
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 208 VNPARGPFHFRAPSKILWKTVRGMIPHKTE 297
++PA H +PS WK +RG++P E
Sbjct: 152 ISPAHNYIHCYSPSGDAWKHIRGLLPRSEE 181
>UniRef50_Q7QGN0 Cluster: ENSANGP00000018113; n=4; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018113 - Anopheles gambiae
str. PEST
Length = 214
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 240 SEVKRSTGWVDITSFTKE*HKLQFVPEEIAGNVNLFTTNDHNFVSFQQDLSNYC 79
+EV R G + FTK + F+ + N + D F SFQ D+ YC
Sbjct: 50 AEVTRKMGEISRKDFTKNSCLIVFIMSHGSANDTIMA-KDGQFYSFQDDVVEYC 102
>UniRef50_O45087 Cluster: Dynein chain, light intermediate protein
1; n=2; Caenorhabditis|Rep: Dynein chain, light
intermediate protein 1 - Caenorhabditis elegans
Length = 643
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 132 TTNDHNFVSFQQDLSNYCGQSTEQVPAPVDYYGLITK 22
T N HNFVS +D C + + + PVD L+TK
Sbjct: 396 TKNAHNFVSLSRD-GRICSWNVDNLTQPVDGKELMTK 431
>UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7;
Chlamydiaceae|Rep: 50S ribosomal protein L13 - Chlamydia
trachomatis
Length = 150
Score = 30.3 bits (65), Expect = 8.8
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Frame = +1
Query: 28 NKA-IVIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFRN 168
NKA V++ G LGRL++ +AK+L G+ V+V+ E++ ++G
Sbjct: 19 NKAWYVVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQ 78
Query: 169 KL--KFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
K+ + F+ V P R P+ ++ V+GM+P KT+ G+
Sbjct: 79 KVYHYYTGFISGMREV-PFENMI-ARKPAYVIEHAVKGMLP-KTKLGR 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,666,526
Number of Sequences: 1657284
Number of extensions: 6302301
Number of successful extensions: 17962
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 17584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17924
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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