Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L09
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0071 - 522920-523063,524125-524212,524289-524677 134 1e-32
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 134 1e-32
03_06_0007 - 30975910-30975921,30976660-30976747,30976850-309769... 64 3e-11
01_06_0707 + 31355929-31356244,31356766-31356992,31357081-313572... 30 0.43
02_05_0442 - 29044736-29046604 29 0.98
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 28 1.3
01_07_0004 - 40354253-40354353,40354598-40354670,40356196-403563... 28 1.7
02_02_0350 + 9239138-9240218,9240755-9240906,9241392-9241457,924... 27 2.3
06_01_0779 - 5823389-5823787 27 4.0
04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318,115... 27 4.0
01_07_0193 - 41892361-41894010 27 4.0
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 26 5.2
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 26 5.2
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010 26 5.2
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258... 26 6.9
04_03_0600 - 17856213-17856382,17856434-17857393,17857644-178578... 26 6.9
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 26 6.9
01_05_0511 - 22831889-22832523,22833743-22833835,22834018-228342... 26 6.9
06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949... 25 9.2
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 25 9.2
>07_01_0071 - 522920-523063,524125-524212,524289-524677
Length = 206
Score = 134 bits (325), Expect = 1e-32
Identities = 57/97 (58%), Positives = 75/97 (77%)
Frame = +1
Query: 16 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 195
+G + +V+D R H+LGRLA+++AK LL G +VVVVRCE++ ISG R K+K++ FLR
Sbjct: 5 SGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYLRFLR 64
Query: 196 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
KR N P+ GP HFRAPS+I W+TVRGMIPHKT RG+
Sbjct: 65 KRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGE 101
>03_06_0010 +
30990002-30990273,30990372-30990488,30990581-30990668,
30991505-30991648
Length = 206
Score = 134 bits (325), Expect = 1e-32
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = +1
Query: 16 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 195
+G +V+D R H+LGRLA++IAK LL G +VVVVRCE+I +SG R K+K++ FLR
Sbjct: 5 SGVCAPRVVVDARHHMLGRLASIIAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 64
Query: 196 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
KR N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+
Sbjct: 65 KRMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGE 101
>03_06_0007 -
30975910-30975921,30976660-30976747,30976850-30976966,
30977081-30977154
Length = 96
Score = 63.7 bits (148), Expect = 3e-11
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 205 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+
Sbjct: 2 NTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGE 35
>01_06_0707 +
31355929-31356244,31356766-31356992,31357081-31357257,
31357355-31357510,31357778-31358054,31358192-31358306,
31360349-31360634,31361196-31361381,31361663-31361833,
31362307-31362426
Length = 676
Score = 29.9 bits (64), Expect = 0.43
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Frame = +1
Query: 40 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFRNKLKFM 183
V+D +LGRLA+ IA + N+ VVVV E++ +SG KL
Sbjct: 541 VVDATDKILGRLASTIAVHIRGKNEATYTPSVDMGAFVVVVNAEKVAVSGKKRSQKLYRR 600
Query: 184 SFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
R R P +I+ VRGM+P
Sbjct: 601 HSGRPGGMKEETFDQLQKRIPERIIEHAVRGMLP 634
>02_05_0442 - 29044736-29046604
Length = 622
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -1
Query: 149 EMLICSQRTTTTLFPSSRTLAITAASRPSKCPRPSITMALLLKPVIF 9
E L+ +TT T+ ++ A + SRP + P P+ + P+ F
Sbjct: 61 EQLVAKTKTTRTVIATTNGRAAPSQSRPRRRPAPAAAASAASLPMTF 107
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 183 HKLQFVPEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVPAPVDYYGLITK 22
H++ V E+ +V F DH+ + L N+C + + VD G +TK
Sbjct: 69 HEIAGVVTEVGADVKGFKVGDHDCENCNSSLENHCSKCVVTYNS-VDSDGTVTK 121
>01_07_0004 -
40354253-40354353,40354598-40354670,40356196-40356319,
40357821-40358222,40358704-40358732
Length = 242
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 107 PSSRTLAITAASRPSKCPRPSITMALLLKPVIF 9
P RT + A + PS CP + ALLL P F
Sbjct: 141 PPIRTPVLPAHALPSSCPLEPLEFALLLLPSPF 173
>02_02_0350 +
9239138-9240218,9240755-9240906,9241392-9241457,
9242715-9242951
Length = 511
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 179 NFNLFLKKLPEM-LICSQRTTTTLFPSSRTLAITAASRPSKCPRPSITM 36
NF++ L + +IC+Q T FP+ +L I S+ S P P TM
Sbjct: 212 NFSVLLLPFSKCSVICTQDINTVWFPNLCSLEIRNCSKLSLPPMPHNTM 260
>06_01_0779 - 5823389-5823787
Length = 132
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 92 RSCWKETKLWSFVVNRLTFPAISSGTN*SLCHSFVKDVM--STQPVDL 229
R CW T W R+ A +S T +LCHS ++ S P D+
Sbjct: 78 RCCW--TSWWIVTAPRMMLSAPTSYTWLNLCHSMASTILVRSNPPRDV 123
>04_01_0112 +
1151242-1151272,1151722-1151928,1151996-1152318,
1152552-1153793
Length = 600
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 122 SFVVNRLTFPAISSGTN*SLCHSFVKDVMSTQPVDLFTSELH 247
+ V+NR T + G N L S++ ++ S + VDL + LH
Sbjct: 35 ALVINRTTLSELYLGGNQLLTTSWISNLTSLRVVDLSQNFLH 76
>01_07_0193 - 41892361-41894010
Length = 549
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 183 HKLQFVPEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVPAP--VDYYGLIT 25
H+ Q P I GN+ F N H F+ + L ST QV P + Y G+ T
Sbjct: 37 HRPQANP--ILGNLVAFLANGHRFLDWSTGLLAAAPASTMQVHGPLGLGYCGVAT 89
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 183 HKLQ-FVPEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVPAPVD 43
+KL+ F P EI + + H F++ +QD++N + +VPAP D
Sbjct: 372 YKLERFDPPEIPSDFD----GRHKFLTPRQDVNNLSDLAPPEVPAPED 415
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 76 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMS 186
A A ++ + VVVV CE+ I+G N +K +S
Sbjct: 2515 AIAFAASAIQNSSVVVVTCEREVITGGHADNSVKLIS 2551
>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
Length = 613
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 52 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQ 138
+GHLL R + + LEG KV + CEQ
Sbjct: 86 KGHLLDRHGLYMCDLCLEGRKVFI--CEQ 112
>04_04_0717 - 27525117-27525248,27525384-27525549,27525629-27525831,
27525911-27526048,27526642-27526725,27526864-27526950,
27527048-27527120,27527169-27527432,27527692-27527768,
27527886-27527957,27528049-27528209,27528238-27528484,
27528588-27528707,27528846-27528929,27529205-27529341,
27529689-27529856,27530093-27530317,27530865-27530952,
27531033-27531194,27532797-27532919
Length = 936
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 179 LCHSFVKDVMSTQPVDLFTSELHQKSSGRPSEE*SHIRLSVG 304
+CH K+V+ T+ LF ++ QKS G LS G
Sbjct: 886 ICHDRQKEVVITKCYHLFCNQCIQKSLGNRQRRCPSCSLSFG 927
>04_03_0600 -
17856213-17856382,17856434-17857393,17857644-17857808,
17858357-17858399
Length = 445
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 RGHLLGRLA-AVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVN 213
+ H++G + + +++G + + RC++IN S K+ F+ L C VN
Sbjct: 144 KAHIIGEGGQGTVYRAVIDGTTMAIKRCKEINES-----KKMDFVQELVILCRVN 193
>03_06_0621 -
35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 164 GTN*SLCHSFVKDVMSTQPVDLFTSELHQKSSGRPSEE 277
G +LCH F++ + +D+ S++ +++S R +E
Sbjct: 808 GEQKNLCHCFLQSLRDKTTMDILDSQVVEEASHREIDE 845
>01_05_0511 -
22831889-22832523,22833743-22833835,22834018-22834215,
22834365-22834494,22834596-22834714,22835244-22835487,
22835607-22835807
Length = 539
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 155 ISSGTN*SLCHSFVKDVMSTQPVDLFTSELHQKSSGRPSEE 277
++ GT+ H VKD + L LH + + RP EE
Sbjct: 370 VAGGTHARAPHRHVKDGRGRRETSLSIVALHARRARRPGEE 410
>06_03_0673 +
23394027-23394094,23394267-23394539,23394613-23394958,
23395031-23395168,23395260-23395385,23395464-23395652,
23395723-23396202,23396274-23397236
Length = 860
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +2
Query: 74 WPQ*LLRSCWKETKLWSFVVNRLTFPAISSG 166
W + LR+ W++ KLW + A+ G
Sbjct: 680 WSRVPLRAWWRDEKLWMVTATSASLAAVFQG 710
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 92 LAITAASRPSKCPRPSITMALLL 24
L + +S PS+ PRP + +A LL
Sbjct: 12 LLLPLSSSPSRAPRPPVPLAALL 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,029,298
Number of Sequences: 37544
Number of extensions: 178465
Number of successful extensions: 500
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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