Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L09
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 158 4e-39
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 158 4e-39
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 158 4e-39
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 150 7e-37
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 68 5e-12
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 68 5e-12
BX537685-1|CAD97811.1| 520|Homo sapiens hypothetical protein pr... 29 3.7
BC067355-1|AAH67355.1| 204|Homo sapiens Unknown (protein for MG... 27 8.5
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 94
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 158 bits (383), Expect = 4e-39
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 96
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 150 bits (364), Expect = 7e-37
Identities = 63/92 (68%), Positives = 82/92 (89%)
Frame = +1
Query: 31 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 210
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL +++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 211 NPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQ 96
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 68.1 bits (159), Expect = 5e-12
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +1
Query: 205 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 35
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 68.1 bits (159), Expect = 5e-12
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +1
Query: 205 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ 35
>BX537685-1|CAD97811.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 89 LRSCWKETKLWSFVVNRLTFPAISSGT 169
LRSC ++ K W RL PA+S T
Sbjct: 9 LRSCRRDLKKWDVQKRRLEIPAVSPST 35
>BC067355-1|AAH67355.1| 204|Homo sapiens Unknown (protein for
MGC:78651) protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 209 TLHLLRRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAASRP 66
TLH +N N L + P++ CS RT T S + TA S P
Sbjct: 33 TLHFSLQNSDNRRLLAEPQPDICECSPRTPTQPGRLSSQTSHTAFSSP 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,259,295
Number of Sequences: 237096
Number of extensions: 941403
Number of successful extensions: 2161
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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