Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L09
(308 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p pro... 171 1e-43
AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB ... 171 1e-43
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 27 3.6
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 27 3.6
AY071029-1|AAL48651.1| 327|Drosophila melanogaster RE11111p pro... 27 4.7
AE014296-3101|AAF49194.2| 327|Drosophila melanogaster CG6812-PA... 27 4.7
AY089641-1|AAL90379.1| 322|Drosophila melanogaster RE65335p pro... 27 6.2
AE014298-98|AAF45542.2| 322|Drosophila melanogaster CG13362-PA ... 27 6.2
BT010257-1|AAQ23575.1| 893|Drosophila melanogaster RE34565p pro... 26 8.2
AY095087-1|AAM11415.1| 694|Drosophila melanogaster RE56367p pro... 26 8.2
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 26 8.2
AF267746-1|AAF82099.1| 715|Drosophila melanogaster rad21 mitoti... 26 8.2
AF186473-1|AAF01417.1| 715|Drosophila melanogaster mitotic cohe... 26 8.2
AF132146-1|AAD33593.1| 715|Drosophila melanogaster DNA repair p... 26 8.2
AF109926-1|AAD04175.1| 715|Drosophila melanogaster rad21 mitoti... 26 8.2
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 26 8.2
AE014296-3687|AAZ66075.1| 175|Drosophila melanogaster CG33770-P... 26 8.2
AE014134-2224|AAF53208.2| 893|Drosophila melanogaster CG12287-P... 26 8.2
>AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p
protein.
Length = 205
Score = 171 bits (417), Expect = 1e-43
Identities = 72/98 (73%), Positives = 91/98 (92%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFL 192
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+KF+++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 193 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
RKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQ 98
>AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB
protein.
Length = 205
Score = 171 bits (417), Expect = 1e-43
Identities = 72/98 (73%), Positives = 91/98 (92%)
Frame = +1
Query: 13 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFL 192
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+KF+++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 193 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 306
RKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQ 98
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 180 KLQFVPEEIAGNVNLFTTNDHNFVSFQQDLS 88
+LQ + EI N LF T NF S QDLS
Sbjct: 691 QLQQLASEIDDNEELFKTISRNFQSLIQDLS 721
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 180 KLQFVPEEIAGNVNLFTTNDHNFVSFQQDLS 88
+LQ + EI N LF T NF S QDLS
Sbjct: 691 QLQQLASEIDDNEELFKTISRNFQSLIQDLS 721
>AY071029-1|AAL48651.1| 327|Drosophila melanogaster RE11111p
protein.
Length = 327
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 165 PEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVP 55
PEE+ N+ L+ + H +L N+CG+ + QVP
Sbjct: 64 PEEVHYNMKLYNSAFHPDTG---ELQNFCGRMSFQVP 97
>AE014296-3101|AAF49194.2| 327|Drosophila melanogaster CG6812-PA
protein.
Length = 327
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 165 PEEIAGNVNLFTTNDHNFVSFQQDLSNYCGQSTEQVP 55
PEE+ N+ L+ + H +L N+CG+ + QVP
Sbjct: 64 PEEVHYNMKLYNSAFHPDTG---ELQNFCGRMSFQVP 97
>AY089641-1|AAL90379.1| 322|Drosophila melanogaster RE65335p
protein.
Length = 322
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 134 SQRTTTTLFPSSRTLAITAASRPSKCPRPSITMALLLKPVIFP 6
S RTT+T + T T + P+ RPS T P + P
Sbjct: 108 SSRTTSTTPAPTTTTTTTTTTTPAPTTRPSTTTTSTTPPPVPP 150
>AE014298-98|AAF45542.2| 322|Drosophila melanogaster CG13362-PA
protein.
Length = 322
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 134 SQRTTTTLFPSSRTLAITAASRPSKCPRPSITMALLLKPVIFP 6
S RTT+T + T T + P+ RPS T P + P
Sbjct: 108 SSRTTSTTPAPTTTTTTTTTTTPAPTTRPSTTTTSTTPPPVPP 150
>BT010257-1|AAQ23575.1| 893|Drosophila melanogaster RE34565p
protein.
Length = 893
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 99 QDLSNYCGQSTEQVPAPVDYYGLITKA 19
Q +++ CG S Q PV Y+G+ T A
Sbjct: 201 QQMTSACGGSDGQTCLPVSYFGMETLA 227
>AY095087-1|AAM11415.1| 694|Drosophila melanogaster RE56367p
protein.
Length = 694
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 102 QQDLSNYCGQSTEQVPAPVDYYGLITKARHFPSC 1
++D NY Q + V VD + L H PSC
Sbjct: 590 KEDSGNYTCQPSNSVSVSVDLHVLSVNIPHRPSC 623
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 155 LPEMLICSQRTTTTLFPSSRTLAITAA--SRPSKCPRPSITMAL 30
L E ++ TTTT +++ + +T S P P+PS T A+
Sbjct: 449 LSENIVILPETTTTTTTTTKPVVLTCPTISPPDTTPKPSTTTAV 492
>AF267746-1|AAF82099.1| 715|Drosophila melanogaster rad21 mitotic
cohesin protein.
Length = 715
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 194 RRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAAS 72
R+ND NLFL +P+ ++ S L + ++L ++ S
Sbjct: 446 RKNDNMSNLFLDHVPDSVVQSLEAPEVLRANHKSLGVSTVS 486
>AF186473-1|AAF01417.1| 715|Drosophila melanogaster mitotic cohesin
SCC1 protein.
Length = 715
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 194 RRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAAS 72
R+ND NLFL +P+ ++ S L + ++L ++ S
Sbjct: 446 RKNDNMSNLFLDHVPDSVVQSLEAPEVLRANHKSLGVSTVS 486
>AF132146-1|AAD33593.1| 715|Drosophila melanogaster DNA repair
protein Rad21 protein.
Length = 715
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 194 RRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAAS 72
R+ND NLFL +P+ ++ S L + ++L ++ S
Sbjct: 446 RKNDNMSNLFLDHVPDSVVQSLEAPEVLRANHKSLGVSTVS 486
>AF109926-1|AAD04175.1| 715|Drosophila melanogaster rad21 mitotic
cohesin protein.
Length = 715
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 194 RRNDINFNLFLKKLPEMLICSQRTTTTLFPSSRTLAITAAS 72
R+ND NLFL +P+ ++ S L + ++L ++ S
Sbjct: 446 RKNDNMSNLFLDHVPDSVVQSLEAPEVLRANHKSLGVSTVS 486
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 155 LPEMLICSQRTTTTLFPSSRTLAITAA--SRPSKCPRPSITMAL 30
L E ++ TTTT +++ + +T S P P+PS T A+
Sbjct: 449 LSENIVILPETTTTTTTTTKPVVLTCPTISPPDTTPKPSTTTAV 492
>AE014296-3687|AAZ66075.1| 175|Drosophila melanogaster CG33770-PA
protein.
Length = 175
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 121 VVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 285
+V +IN+ +++N LK+ +FLR +C +N + ++ R W+ G++P
Sbjct: 91 IVNAAKINLFKKWYKNLLKYGNFLR-QCPLNASH--YYLRD-----WQFGEGLVP 137
>AE014134-2224|AAF53208.2| 893|Drosophila melanogaster CG12287-PB,
isoform B protein.
Length = 893
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 99 QDLSNYCGQSTEQVPAPVDYYGLITKA 19
Q +++ CG S Q PV Y+G+ T A
Sbjct: 201 QQMTSACGGSDGQTCLPVSYFGMETLA 227
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,729,018
Number of Sequences: 53049
Number of extensions: 289732
Number of successful extensions: 781
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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