Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L08
         (267 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVM2 Cluster: Putative uncharacterized protein MSV220...    33   0.94 
UniRef50_Q8ILX0 Cluster: Putative uncharacterized protein; n=2; ...    32   2.2  
UniRef50_A5K488 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q236J4 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_A0B9U3 Cluster: Putative uncharacterized protein precur...    31   3.8  
UniRef50_Q27336 Cluster: Pfg27/25; n=4; Plasmodium (Laverania)|R...    31   5.0  
UniRef50_A4TKY1 Cluster: Membrane protein; n=11; Yersinia|Rep: M...    31   6.7  
UniRef50_Q1QB18 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q23RL6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q233T9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_O45162 Cluster: Serpentine receptor, class h protein 27...    30   8.8  
UniRef50_A0CWQ5 Cluster: Chromosome undetermined scaffold_3, who...    30   8.8  
UniRef50_A4UC09 Cluster: Putative uncharacterized protein; n=2; ...    30   8.8  

>UniRef50_Q9YVM2 Cluster: Putative uncharacterized protein MSV220;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV220 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 120

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +3

Query: 126 KYIYYYHVQSHWKL*ITNYLIINYSNGLHTKIKMQKIMKSSNIK 257
           KY  Y H+ +H+   I NY++ NYS  L  K K  KI+ ++N K
Sbjct: 68  KYRNYEHLINHYSEIIKNYILHNYS--LFDKEKCDKILNNNNSK 109


>UniRef50_Q8ILX0 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 3218

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 38  NI*FSKFPY-LQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAY 214
           +I F+K+ Y L ++ +S     + LY++I  I  +   TK   T  Y + +N   K+F Y
Sbjct: 208 HIQFNKYFYKLIINKLSYYKIKKDLYVNIVNI--VNEITKYYPTYGYDILNNIKIKYFPY 265

Query: 215 KN*NAKNY 238
           KN N   Y
Sbjct: 266 KNINHSFY 273


>UniRef50_A5K488 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1638

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 49   FKVPLLTSITSEYTNTYSRSVHLHIPNIFTIIM--YKVTGNFELQ 177
            FK+PL T   S Y NT++R + +   N++ +I    ++  +F L+
Sbjct: 1260 FKMPLDTMTISIYVNTFARKIKIGFKNLYDVIKDDVRIVSSFSLK 1304


>UniRef50_Q236J4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 657

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 171 ITNYLIINYSNGLHTKIKMQKIMKSSN 251
           I NY ++NY NG HT +   +I+K S+
Sbjct: 103 IMNYALLNYQNGSHTNLTRLQIVKCSH 129


>UniRef50_A0B9U3 Cluster: Putative uncharacterized protein
           precursor; n=1; Methanosaeta thermophila PT|Rep:
           Putative uncharacterized protein precursor -
           Methanosaeta thermophila (strain DSM 6194 / PT)
           (Methanothrixthermophila (strain DSM 6194 / PT))
          Length = 449

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 63  TYKYHQ*VH*HILAVCTSPYSKYIYYY 143
           T+ Y + V  HILA CT+ +S YIY Y
Sbjct: 392 TWFYGEKVGWHILAYCTTDWSNYIYIY 418


>UniRef50_Q27336 Cluster: Pfg27/25; n=4; Plasmodium (Laverania)|Rep:
           Pfg27/25 - Plasmodium falciparum
          Length = 217

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 128 IYLLLSCTKSLETLNYKLFDNKLFKWFAYKN*NAKNYEIL 247
           IYLL++ +K  E  NY L D    + +  KN N  NY ++
Sbjct: 50  IYLLMTLSKDPEKFNYALKDRVSIRRYVRKNQNRYNYFLI 89


>UniRef50_A4TKY1 Cluster: Membrane protein; n=11; Yersinia|Rep:
           Membrane protein - Yersinia pestis (strain Pestoides F)
          Length = 284

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +2

Query: 80  VSTLTHTRGLYI--SIFQIYLLLSCTKSLETLNY-KLFDNKLFKWFAYKN 220
           + TL  T  +++  SI  I  +     SL  L Y +L+DN LF +F Y+N
Sbjct: 35  IITLALTTSIFLTPSILSILCVAIAAVSLSALLYLRLYDNPLFTYFLYEN 84


>UniRef50_Q1QB18 Cluster: Putative uncharacterized protein; n=1;
           Psychrobacter cryohalolentis K5|Rep: Putative
           uncharacterized protein - Psychrobacter cryohalolentis
           (strain K5)
          Length = 336

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 104 GLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAYKN*NAKNYEI 244
           G+ I+IF  YLL+    +   L   L++ K  +   Y +   KNYEI
Sbjct: 230 GIAIAIFICYLLIKAFSASFILPADLYNTKTLEAVIYNDFKTKNYEI 276


>UniRef50_Q23RL6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 562

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +2

Query: 47  FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKL 196
           F     L +  +S   HT G + SIF      SC   LE LN  LFD K+
Sbjct: 257 FKNLKELYLQGISFSQHTGGKFFSIF------SCLPQLEKLNLDLFDCKI 300


>UniRef50_Q233T9 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1196

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/45 (26%), Positives = 29/45 (64%)
 Frame = +1

Query: 16   FITKSLLKHLIFKVPLLTSITSEYTNTYSRSVHLHIPNIFTIIMY 150
            F  +++L++++FK+  ++S+ + Y N    SV ++  +I T ++Y
Sbjct: 944  FGQENILRNILFKLSCISSLNNAYDNIVRNSVIMYQYHIDTFLLY 988


>UniRef50_O45162 Cluster: Serpentine receptor, class h protein 270;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class h protein 270 - Caenorhabditis elegans
          Length = 358

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +2

Query: 47  FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAYKN*N 226
           F  FP     P+  L +T G+ I + Q YL+L    +L +    LF+N+ F  FA K+ +
Sbjct: 75  FVLFPAFAGFPLGVLKYT-GISIDV-QTYLILISYSALGSSILTLFENRYFLMFA-KHSS 131

Query: 227 AKNY 238
            +NY
Sbjct: 132 WRNY 135


>UniRef50_A0CWQ5 Cluster: Chromosome undetermined scaffold_3, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_3,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1799

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 77  PVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAYK 217
           P+ T THT+ +  + ++  LLL+    +ET+N     NK+ K  + K
Sbjct: 508 PIFTYTHTKQVDANYYESLLLLNVHFQIETINEFSKSNKILKQVSNK 554


>UniRef50_A4UC09 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 550

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 135 KYIWNMEMYRPRVCVSVLTGDT 70
           KY W +E+++    +SVLTGDT
Sbjct: 526 KYTWKVELHKSDKVISVLTGDT 547


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,357,253
Number of Sequences: 1657284
Number of extensions: 3894649
Number of successful extensions: 10283
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10276
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)